Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RN7SKP83-201ENST00000516512 178 ntBASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 AC012468.1-201ENST00000604888 430 ntBASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 AC013468.1-201ENST00000608680 598 ntBASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 AP004247.3-201ENST00000608682 624 ntBASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.14□□□□□ -1.91
CLCF1Q9UBD9 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 FRG1CP-201ENST00000358464 769 ntBASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 RNA5SP42-201ENST00000364278 115 ntBASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 RNU6-356P-201ENST00000384140 107 ntBASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 SNORD17-201ENST00000390930 237 ntBASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 PTMAP5-201ENST00000393073 333 ntBASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 PSMA2P3-201ENST00000429685 675 ntBASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 MRPS18BP2-201ENST00000434310 759 ntBASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 AC000041.1-201ENST00000439655 175 ntBASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 RAB11AP1-201ENST00000442978 646 ntBASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 RNU7-140P-201ENST00000459546 60 ntBASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 AC146507.1-201ENST00000468335 354 ntBASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 AC025518.1-201ENST00000479856 347 ntBASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 NAMPTP2-201ENST00000505629 1115 ntBASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 NDUFB4P9-201ENST00000511646 388 ntBASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 OR8L1P-201ENST00000534005 955 ntBASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 AC087894.1-201ENST00000538359 518 ntBASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 AC006518.2-201ENST00000542513 940 ntBASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 CYB5AP5-201ENST00000549779 389 ntBASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 NIFKP8-201ENST00000560500 874 ntBASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 EIF5A2P1-201ENST00000564027 460 ntBASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 AC010735.1-201ENST00000567305 1026 ntBASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 AC090079.2-201ENST00000575289 768 ntBASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 MIR4504-201ENST00000577413 92 ntBASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 Z82195.1-201ENST00000604558 398 ntBASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 RNA5SP108-201ENST00000605921 117 ntBASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 U7.8-201ENST00000619968 63 ntBASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 AP002371.2-201ENST00000624450 503 ntBASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 AL121594.5-201ENST00000631724 573 ntBASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 AC068620.4-201ENST00000636730 1182 ntBASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 AC006927.2-201ENST00000639256 389 ntBASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 RPS4XP5-202ENST00000449995 1334 ntBASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 DCAF13P1-201ENST00000495256 1330 ntBASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CLCF1Q9UBD9 MTCO1P14-201ENST00000441695 1559 ntBASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 SGO1P1-201ENST00000603525 1447 ntBASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 RNU6-1243P-201ENST00000364028 107 ntBASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 SNORD6-201ENST00000365444 73 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms