Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 IGHV3-76-201ENST00000522465 295 ntBASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 AC068587.5-201ENST00000528506 175 ntBASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 AC128657.1-201ENST00000549459 145 ntBASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 AC090971.4-201ENST00000560291 1800 ntBASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 AC022164.1-201ENST00000568767 2673 ntBASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 AC068790.3-201ENST00000602988 553 ntBASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 AL136984.1-201ENST00000607611 1893 ntBASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 SNORA51.1-201ENST00000363243 140 ntBASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 AL031985.1-201ENST00000392713 418 ntBASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 AL157702.1-201ENST00000398764 426 ntBASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 RPL21P1-201ENST00000399532 476 ntBASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 MIR1252-201ENST00000408861 65 ntBASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 BX323014.1-201ENST00000412876 237 ntBASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 AC068533.1-201ENST00000418542 415 ntBASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 AC012065.2-201ENST00000421295 375 ntBASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 AC073910.1-201ENST00000445047 438 ntBASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 AC092967.1-201ENST00000449016 481 ntBASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 AC004801.2-202ENST00000463559 283 ntBASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 RN7SL369P-201ENST00000477138 299 ntBASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 RNA5SP441-201ENST00000516809 88 ntBASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 AL137161.1-201ENST00000532231 390 ntBASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 AC005332.4-201ENST00000592752 579 ntBASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 AL138726.1-201ENST00000614873 333 ntBASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 AP001486.3-201ENST00000615334 372 ntBASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 AC083837.1-201ENST00000565297 2994 ntBASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CUEDC1Q9NWM3 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 GUCY1B2-204ENST00000531898 1979 ntBASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 RNA5SP350-201ENST00000363298 111 ntBASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 RNU6-770P-201ENST00000363929 105 ntBASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 Y_RNA.276-201ENST00000364732 109 ntBASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 RNU6-432P-201ENST00000384196 109 ntBASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 RNU2-23P-201ENST00000410545 195 ntBASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 POLHP1-201ENST00000411806 470 ntBASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 RPS15AP10-201ENST00000432472 382 ntBASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 AC110602.1-201ENST00000437414 318 ntBASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 RPL23AP89-201ENST00000439324 255 ntBASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 AL359672.1-201ENST00000442302 409 ntBASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 AC007967.1-201ENST00000455422 1159 ntBASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 PRELID3BP1-201ENST00000457142 540 ntBASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 RN7SL254P-201ENST00000460609 284 ntBASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 AC079804.1-201ENST00000461922 436 ntBASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms