Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
TLR9Q9NR96 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
TLR9Q9NR96 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.08□□□□□ -1.6
TLR9Q9NR96 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TLR9Q9NR96 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TLR9Q9NR96 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TLR9Q9NR96 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.08□□□□□ -1.6
TLR9Q9NR96 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
TLR9Q9NR96 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TLR9Q9NR96 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TLR9Q9NR96 AP002001.2-201ENST00000529025 1469 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 OR4G11P-202ENST00000642116 1414 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC5.08□□□□□ -1.6
TLR9Q9NR96 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
TLR9Q9NR96 Y_RNA.9-201ENST00000362354 101 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 RNU6-249P-201ENST00000363016 102 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
TLR9Q9NR96 CCNG1P1-201ENST00000406783 885 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 RN7SKP16-201ENST00000410180 299 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 RN7SKP267-201ENST00000410381 285 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 HMGB3P23-201ENST00000414981 585 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.08□□□□□ -1.6
TLR9Q9NR96 AC083875.1-201ENST00000419509 405 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 RPS27AP14-201ENST00000422868 454 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.08□□□□□ -1.6
TLR9Q9NR96 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC5.08□□□□□ -1.6
TLR9Q9NR96 RPS17P8-201ENST00000434525 335 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC5.08□□□□□ -1.6
TLR9Q9NR96 USP9YP8-201ENST00000441913 500 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.08□□□□□ -1.6
TLR9Q9NR96 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.08□□□□□ -1.6
TLR9Q9NR96 FDX1P2-201ENST00000450769 375 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 SNRPFP4-201ENST00000456366 242 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 AC011276.1-201ENST00000469688 323 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 NIP7P2-201ENST00000485801 544 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.08□□□□□ -1.6
TLR9Q9NR96 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 AC008628.2-201ENST00000502605 298 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.08□□□□□ -1.6
TLR9Q9NR96 AC006499.2-201ENST00000513470 337 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 RNU6-488P-201ENST00000515918 99 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 RNU6-513P-201ENST00000516104 104 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.08□□□□□ -1.6
TLR9Q9NR96 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.08□□□□□ -1.6
TLR9Q9NR96 CYCSP29-201ENST00000533731 318 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.08□□□□□ -1.6
TLR9Q9NR96 AC068714.1-201ENST00000559623 800 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.08□□□□□ -1.6
TLR9Q9NR96 AC053481.3-201ENST00000577881 843 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 SNORA74C-1-201ENST00000580726 201 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.08□□□□□ -1.6
TLR9Q9NR96 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.08□□□□□ -1.6
TLR9Q9NR96 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC5.08□□□□□ -1.6
TLR9Q9NR96 AC115286.1-201ENST00000604298 434 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 AC018695.5-201ENST00000605872 315 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 AL121890.2-201ENST00000617644 465 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC5.08□□□□□ -1.6
TLR9Q9NR96 AC231657.1-201ENST00000624313 397 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 AC124864.2-201ENST00000624736 186 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 AC116563.2-201ENST00000624751 535 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.08□□□□□ -1.6
TLR9Q9NR96 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.08□□□□□ -1.6
TLR9Q9NR96 LRRC77P-213ENST00000637727 880 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TLR9Q9NR96 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TLR9Q9NR96 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TLR9Q9NR96 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.08□□□□□ -1.6
TLR9Q9NR96 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.08□□□□□ -1.6
TLR9Q9NR96 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TLR9Q9NR96 MTND5P17-201ENST00000418405 1603 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.08□□□□□ -1.6
TLR9Q9NR96 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
TLR9Q9NR96 AC092326.2-201ENST00000624772 1561 ntBASIC5.08□□□□□ -1.6
TLR9Q9NR96 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.07□□□□□ -1.6
TLR9Q9NR96 AC092079.1-201ENST00000558620 1985 ntBASIC5.07□□□□□ -1.6
TLR9Q9NR96 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TLR9Q9NR96 TLK1P1-201ENST00000456760 2440 ntBASIC5.07□□□□□ -1.6
TLR9Q9NR96 AL731566.1-201ENST00000620490 1937 ntBASIC5.07□□□□□ -1.6
TLR9Q9NR96 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
TLR9Q9NR96 MTND4P12-201ENST00000498999 1377 ntBASIC5.07□□□□□ -1.6
TLR9Q9NR96 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TLR9Q9NR96 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TLR9Q9NR96 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
TLR9Q9NR96 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
TLR9Q9NR96 RNA5SP509-201ENST00000364577 119 ntBASIC5.07□□□□□ -1.6
TLR9Q9NR96 XGY1-201ENST00000381172 446 ntBASIC5.07□□□□□ -1.6
TLR9Q9NR96 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TLR9Q9NR96 RPS24P12-201ENST00000402084 394 ntBASIC5.07□□□□□ -1.6
TLR9Q9NR96 AL445189.1-201ENST00000405722 338 ntBASIC5.07□□□□□ -1.6
TLR9Q9NR96 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.07□□□□□ -1.6
TLR9Q9NR96 HMGB1P11-201ENST00000413899 637 ntBASIC5.07□□□□□ -1.6
TLR9Q9NR96 AIMP1P1-201ENST00000418670 937 ntBASIC5.07□□□□□ -1.6
TLR9Q9NR96 AL645608.4-201ENST00000423619 154 ntBASIC5.07□□□□□ -1.6
TLR9Q9NR96 ZYG11AP1-201ENST00000430329 837 ntBASIC5.07□□□□□ -1.6
TLR9Q9NR96 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.07□□□□□ -1.6
TLR9Q9NR96 AC010881.1-201ENST00000433830 235 ntBASIC5.07□□□□□ -1.6
TLR9Q9NR96 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.07□□□□□ -1.6
TLR9Q9NR96 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.07□□□□□ -1.6
TLR9Q9NR96 CBX1P1-201ENST00000440184 427 ntBASIC5.07□□□□□ -1.6
TLR9Q9NR96 AL118496.2-201ENST00000448300 230 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms