Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 AP000926.4-201ENST00000527351 454 ntBASIC3.89□□□□□ -1.79
SIX2Q9NPC8 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 AC107982.3-201ENST00000584957 985 ntBASIC3.89□□□□□ -1.79
SIX2Q9NPC8 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 AC133552.5-201ENST00000604266 540 ntBASIC3.89□□□□□ -1.79
SIX2Q9NPC8 AL049634.3-201ENST00000604968 457 ntBASIC3.89□□□□□ -1.79
SIX2Q9NPC8 AL360219.1-201ENST00000610230 366 ntBASIC3.89□□□□□ -1.79
SIX2Q9NPC8 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 DCAF13P3-201ENST00000561147 1334 ntBASIC3.89□□□□□ -1.79
SIX2Q9NPC8 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 CEP170P1-201ENST00000502249 4587 ntBASIC3.88□□□□□ -1.79
SIX2Q9NPC8 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
SIX2Q9NPC8 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SIX2Q9NPC8 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SIX2Q9NPC8 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SIX2Q9NPC8 AL512646.1-201ENST00000269395 1077 ntBASIC3.88□□□□□ -1.79
SIX2Q9NPC8 OR52B1P-201ENST00000316506 909 ntBASIC3.88□□□□□ -1.79
SIX2Q9NPC8 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SIX2Q9NPC8 MIR423-201ENST00000362201 94 ntBASIC3.88□□□□□ -1.79
SIX2Q9NPC8 Y_RNA.169-201ENST00000363745 96 ntBASIC3.88□□□□□ -1.79
SIX2Q9NPC8 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SIX2Q9NPC8 SNORD3H-201ENST00000384486 214 ntBASIC3.88□□□□□ -1.79
SIX2Q9NPC8 MIR217-201ENST00000384817 110 ntBASIC3.88□□□□□ -1.79
SIX2Q9NPC8 MIR92A2-201ENST00000385299 75 ntBASIC3.88□□□□□ -1.79
SIX2Q9NPC8 U3.39-201ENST00000408569 239 ntBASIC3.88□□□□□ -1.79
SIX2Q9NPC8 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.88□□□□□ -1.79
SIX2Q9NPC8 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.88□□□□□ -1.79
SIX2Q9NPC8 RAC1P3-201ENST00000416129 580 ntBASIC3.88□□□□□ -1.79
SIX2Q9NPC8 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.88□□□□□ -1.79
SIX2Q9NPC8 PAICSP7-201ENST00000419829 962 ntBASIC3.88□□□□□ -1.79
SIX2Q9NPC8 MTND2P18-201ENST00000419962 1030 ntBASIC3.88□□□□□ -1.79
SIX2Q9NPC8 RPL7P44-201ENST00000424827 742 ntBASIC3.88□□□□□ -1.79
SIX2Q9NPC8 AC006989.1-201ENST00000427212 131 ntBASIC3.88□□□□□ -1.79
SIX2Q9NPC8 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.88□□□□□ -1.79
SIX2Q9NPC8 USP9YP22-201ENST00000438971 294 ntBASIC3.88□□□□□ -1.79
SIX2Q9NPC8 AL354710.1-201ENST00000453641 246 ntBASIC3.88□□□□□ -1.79
SIX2Q9NPC8 AC007967.1-201ENST00000455422 1159 ntBASIC3.88□□□□□ -1.79
SIX2Q9NPC8 RPL37P3-201ENST00000456825 293 ntBASIC3.88□□□□□ -1.79
SIX2Q9NPC8 RPL5P23-201ENST00000496040 868 ntBASIC3.88□□□□□ -1.79
SIX2Q9NPC8 UBE2CP3-201ENST00000502715 450 ntBASIC3.88□□□□□ -1.79
SIX2Q9NPC8 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SIX2Q9NPC8 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.88□□□□□ -1.79
SIX2Q9NPC8 PCBP2P3-201ENST00000509726 843 ntBASIC3.88□□□□□ -1.79
SIX2Q9NPC8 AC118465.1-201ENST00000513820 1271 ntBASIC3.88□□□□□ -1.79
SIX2Q9NPC8 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.88□□□□□ -1.79
SIX2Q9NPC8 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.88□□□□□ -1.79
SIX2Q9NPC8 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.88□□□□□ -1.79
SIX2Q9NPC8 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.88□□□□□ -1.79
SIX2Q9NPC8 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.88□□□□□ -1.79
SIX2Q9NPC8 AC004217.3-201ENST00000551552 878 ntBASIC3.88□□□□□ -1.79
SIX2Q9NPC8 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.88□□□□□ -1.79
SIX2Q9NPC8 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.88□□□□□ -1.79
SIX2Q9NPC8 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.88□□□□□ -1.79
SIX2Q9NPC8 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.88□□□□□ -1.79
SIX2Q9NPC8 AL357559.1-201ENST00000622228 274 ntBASIC3.88□□□□□ -1.79
SIX2Q9NPC8 AC067852.7-201ENST00000623270 535 ntBASIC3.88□□□□□ -1.79
SIX2Q9NPC8 AC007490.1-201ENST00000624321 703 ntBASIC3.88□□□□□ -1.79
SIX2Q9NPC8 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.88□□□□□ -1.79
SIX2Q9NPC8 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.88□□□□□ -1.79
SIX2Q9NPC8 AC015813.6-201ENST00000624409 5808 ntBASIC3.88□□□□□ -1.79
SIX2Q9NPC8 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.88□□□□□ -1.79
SIX2Q9NPC8 AC007823.1-201ENST00000569932 1566 ntBASIC3.88□□□□□ -1.79
SIX2Q9NPC8 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.88□□□□□ -1.79
SIX2Q9NPC8 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SIX2Q9NPC8 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SIX2Q9NPC8 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
SIX2Q9NPC8 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
SIX2Q9NPC8 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SIX2Q9NPC8 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
SIX2Q9NPC8 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SIX2Q9NPC8 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
SIX2Q9NPC8 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SIX2Q9NPC8 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SIX2Q9NPC8 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SIX2Q9NPC8 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
SIX2Q9NPC8 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
SIX2Q9NPC8 RNU6-157P-201ENST00000383957 107 ntBASIC3.87□□□□□ -1.79
SIX2Q9NPC8 RSL24D1P4-201ENST00000400938 484 ntBASIC3.87□□□□□ -1.79
SIX2Q9NPC8 RNU2-65P-201ENST00000410162 185 ntBASIC3.87□□□□□ -1.79
SIX2Q9NPC8 RHEBP3-201ENST00000411920 351 ntBASIC3.87□□□□□ -1.79
SIX2Q9NPC8 RAP1BP1-201ENST00000412709 553 ntBASIC3.87□□□□□ -1.79
SIX2Q9NPC8 DBIP2-201ENST00000419076 262 ntBASIC3.87□□□□□ -1.79
SIX2Q9NPC8 RPL7P53-201ENST00000421245 739 ntBASIC3.87□□□□□ -1.79
SIX2Q9NPC8 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.87□□□□□ -1.79
SIX2Q9NPC8 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms