Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AC010881.1-201ENST00000433830 235 ntBASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 FTH1P1-201ENST00000437933 532 ntBASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 ISCA1P2-201ENST00000438679 421 ntBASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 RPS26P30-201ENST00000443431 335 ntBASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 AL034418.1-201ENST00000448675 860 ntBASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 NPM1P13-201ENST00000452663 865 ntBASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 AC023598.1-201ENST00000472521 361 ntBASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 AC005726.1-201ENST00000494679 427 ntBASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 MIR2276-201ENST00000516886 89 ntBASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 HIGD1AP6-201ENST00000521833 279 ntBASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 TRAV37-201ENST00000553906 342 ntBASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 AC005412.1-201ENST00000580812 1049 ntBASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 MIR5187-201ENST00000583479 76 ntBASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 AL590282.1-201ENST00000610379 1136 ntBASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 ZNF826P-207ENST00000622273 1910 ntBASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 MTND5P27-201ENST00000428871 1720 ntBASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 ZNF734P-201ENST00000419494 1534 ntBASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 AC007656.2-201ENST00000624902 4547 ntBASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 SNORD56.3-201ENST00000363507 71 ntBASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 RNA5SP515-201ENST00000364570 118 ntBASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 SSXP10-201ENST00000402595 565 ntBASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 RNA5SP56-201ENST00000410277 118 ntBASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 SDCBPP2-201ENST00000424643 885 ntBASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 AL691517.1-201ENST00000440833 1235 ntBASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 snoU13.24-201ENST00000458998 104 ntBASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 AL133162.1-201ENST00000463228 453 ntBASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 MTCO3P35-201ENST00000485582 781 ntBASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 AC010265.1-201ENST00000513509 211 ntBASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 RN7SKP116-201ENST00000516902 319 ntBASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 RNA5SP380-201ENST00000517190 98 ntBASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 AC092470.1-201ENST00000546187 132 ntBASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 AC004217.3-201ENST00000551552 878 ntBASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 AL020997.2-201ENST00000602607 184 ntBASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 AC113368.1-201ENST00000603736 382 ntBASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 AC096586.1-201ENST00000610267 561 ntBASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 AC099778.2-201ENST00000610904 211 ntBASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 AC073476.4-201ENST00000628409 72 ntBASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CCNB1IP1Q9NPC3 AL355578.1-201ENST00000607405 1328 ntBASIC3.22□□□□□ -1.89
CCNB1IP1Q9NPC3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.22□□□□□ -1.89
CCNB1IP1Q9NPC3 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCNB1IP1Q9NPC3 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.22□□□□□ -1.89
CCNB1IP1Q9NPC3 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCNB1IP1Q9NPC3 RNU6-837P-201ENST00000391056 108 ntBASIC3.22□□□□□ -1.89
CCNB1IP1Q9NPC3 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.22□□□□□ -1.89
CCNB1IP1Q9NPC3 RPL21P110-201ENST00000433345 446 ntBASIC3.22□□□□□ -1.89
CCNB1IP1Q9NPC3 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.22□□□□□ -1.89
CCNB1IP1Q9NPC3 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCNB1IP1Q9NPC3 TPRKBP1-201ENST00000456243 481 ntBASIC3.22□□□□□ -1.89
CCNB1IP1Q9NPC3 AL024509.2-201ENST00000493462 493 ntBASIC3.22□□□□□ -1.89
CCNB1IP1Q9NPC3 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.22□□□□□ -1.89
CCNB1IP1Q9NPC3 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.22□□□□□ -1.89
CCNB1IP1Q9NPC3 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCNB1IP1Q9NPC3 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.22□□□□□ -1.89
CCNB1IP1Q9NPC3 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.22□□□□□ -1.89
CCNB1IP1Q9NPC3 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.22□□□□□ -1.89
CCNB1IP1Q9NPC3 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.22□□□□□ -1.89
CCNB1IP1Q9NPC3 AC106734.1-201ENST00000568646 663 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms