Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AL138478.1-201ENST00000612252 832 ntBASIC4.29□□□□□ -1.72
UPF2Q9HAU5 AC006338.2-201ENST00000616864 791 ntBASIC4.29□□□□□ -1.72
UPF2Q9HAU5 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
UPF2Q9HAU5 AC069209.1-201ENST00000619282 651 ntBASIC4.29□□□□□ -1.72
UPF2Q9HAU5 MIR6758-201ENST00000620653 63 ntBASIC4.29□□□□□ -1.72
UPF2Q9HAU5 MTND2P41-201ENST00000637599 773 ntBASIC4.29□□□□□ -1.72
UPF2Q9HAU5 GTF2H2B-203ENST00000508065 1432 ntBASIC4.29□□□□□ -1.72
UPF2Q9HAU5 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
UPF2Q9HAU5 AC007823.1-201ENST00000569932 1566 ntBASIC4.28□□□□□ -1.72
UPF2Q9HAU5 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
UPF2Q9HAU5 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
UPF2Q9HAU5 ENSAP3-201ENST00000312710 333 ntBASIC4.28□□□□□ -1.72
UPF2Q9HAU5 RNU6-805P-201ENST00000365643 106 ntBASIC4.28□□□□□ -1.72
UPF2Q9HAU5 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.28□□□□□ -1.72
UPF2Q9HAU5 RPS7P13-201ENST00000413955 498 ntBASIC4.28□□□□□ -1.72
UPF2Q9HAU5 BTF3P8-201ENST00000414577 526 ntBASIC4.28□□□□□ -1.72
UPF2Q9HAU5 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.28□□□□□ -1.72
UPF2Q9HAU5 TAF13P2-201ENST00000416876 286 ntBASIC4.28□□□□□ -1.72
UPF2Q9HAU5 AL356320.2-201ENST00000417263 507 ntBASIC4.28□□□□□ -1.72
UPF2Q9HAU5 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.28□□□□□ -1.72
UPF2Q9HAU5 C4BPAP2-201ENST00000428434 478 ntBASIC4.28□□□□□ -1.72
UPF2Q9HAU5 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.28□□□□□ -1.72
UPF2Q9HAU5 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.28□□□□□ -1.72
UPF2Q9HAU5 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.28□□□□□ -1.72
UPF2Q9HAU5 HMGB3P8-201ENST00000449709 577 ntBASIC4.28□□□□□ -1.72
UPF2Q9HAU5 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.28□□□□□ -1.72
UPF2Q9HAU5 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.28□□□□□ -1.72
UPF2Q9HAU5 TRBV8-2-201ENST00000475637 270 ntBASIC4.28□□□□□ -1.72
UPF2Q9HAU5 AC011037.1-201ENST00000483964 558 ntBASIC4.28□□□□□ -1.72
UPF2Q9HAU5 AC104687.1-201ENST00000485829 412 ntBASIC4.28□□□□□ -1.72
UPF2Q9HAU5 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.28□□□□□ -1.72
UPF2Q9HAU5 RN7SKP122-201ENST00000515923 296 ntBASIC4.28□□□□□ -1.72
UPF2Q9HAU5 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.28□□□□□ -1.72
UPF2Q9HAU5 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.28□□□□□ -1.72
UPF2Q9HAU5 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.28□□□□□ -1.72
UPF2Q9HAU5 OR4C2P-201ENST00000530855 1064 ntBASIC4.28□□□□□ -1.72
UPF2Q9HAU5 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.28□□□□□ -1.72
UPF2Q9HAU5 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.28□□□□□ -1.72
UPF2Q9HAU5 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.28□□□□□ -1.72
UPF2Q9HAU5 NF1P5-201ENST00000588287 448 ntBASIC4.28□□□□□ -1.72
UPF2Q9HAU5 AC002487.1-201ENST00000604565 994 ntBASIC4.28□□□□□ -1.72
UPF2Q9HAU5 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
UPF2Q9HAU5 AL392112.1-201ENST00000605115 829 ntBASIC4.28□□□□□ -1.72
UPF2Q9HAU5 AC009237.15-201ENST00000610252 501 ntBASIC4.28□□□□□ -1.72
UPF2Q9HAU5 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
UPF2Q9HAU5 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
UPF2Q9HAU5 AC021755.4-201ENST00000616620 456 ntBASIC4.28□□□□□ -1.72
UPF2Q9HAU5 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
UPF2Q9HAU5 AL158163.2-201ENST00000619110 700 ntBASIC4.28□□□□□ -1.72
UPF2Q9HAU5 AL713922.2-201ENST00000619384 716 ntBASIC4.28□□□□□ -1.72
UPF2Q9HAU5 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
UPF2Q9HAU5 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
UPF2Q9HAU5 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
UPF2Q9HAU5 MIR6810-201ENST00000622701 70 ntBASIC4.28□□□□□ -1.72
UPF2Q9HAU5 CR392039.4-201ENST00000624968 501 ntBASIC4.28□□□□□ -1.72
UPF2Q9HAU5 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.28□□□□□ -1.72
UPF2Q9HAU5 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.28□□□□□ -1.72
UPF2Q9HAU5 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
UPF2Q9HAU5 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
UPF2Q9HAU5 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
UPF2Q9HAU5 AC099786.3-201ENST00000565735 1410 ntBASIC4.28□□□□□ -1.72
UPF2Q9HAU5 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
UPF2Q9HAU5 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.28□□□□□ -1.73
UPF2Q9HAU5 AC111188.2-201ENST00000529697 1387 ntBASIC4.27□□□□□ -1.73
UPF2Q9HAU5 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
UPF2Q9HAU5 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
UPF2Q9HAU5 FAM91A3P-201ENST00000456826 2544 ntBASIC4.27□□□□□ -1.73
UPF2Q9HAU5 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
UPF2Q9HAU5 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.27□□□□□ -1.73
UPF2Q9HAU5 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
UPF2Q9HAU5 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.27□□□□□ -1.73
UPF2Q9HAU5 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
UPF2Q9HAU5 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
UPF2Q9HAU5 SNORA73.2-201ENST00000364946 201 ntBASIC4.27□□□□□ -1.73
UPF2Q9HAU5 SNORD116-12-201ENST00000384468 92 ntBASIC4.27□□□□□ -1.73
UPF2Q9HAU5 TAS2R15P-201ENST00000390674 928 ntBASIC4.27□□□□□ -1.73
UPF2Q9HAU5 AL513175.2-201ENST00000422071 443 ntBASIC4.27□□□□□ -1.73
UPF2Q9HAU5 ARF4P2-201ENST00000430209 526 ntBASIC4.27□□□□□ -1.73
UPF2Q9HAU5 HMGB1P45-201ENST00000435986 653 ntBASIC4.27□□□□□ -1.73
UPF2Q9HAU5 AC105402.2-201ENST00000438503 358 ntBASIC4.27□□□□□ -1.73
UPF2Q9HAU5 AL589880.1-201ENST00000448271 287 ntBASIC4.27□□□□□ -1.73
UPF2Q9HAU5 AP000893.1-201ENST00000474462 794 ntBASIC4.27□□□□□ -1.73
UPF2Q9HAU5 AC091860.1-201ENST00000505723 432 ntBASIC4.27□□□□□ -1.73
UPF2Q9HAU5 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.27□□□□□ -1.73
UPF2Q9HAU5 AC010285.3-201ENST00000511668 676 ntBASIC4.27□□□□□ -1.73
UPF2Q9HAU5 PRELID3BP4-201ENST00000515476 571 ntBASIC4.27□□□□□ -1.73
UPF2Q9HAU5 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.27□□□□□ -1.73
UPF2Q9HAU5 RN7SKP289-201ENST00000517244 295 ntBASIC4.27□□□□□ -1.73
UPF2Q9HAU5 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.27□□□□□ -1.73
UPF2Q9HAU5 MTCO2P15-201ENST00000532655 656 ntBASIC4.27□□□□□ -1.73
UPF2Q9HAU5 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.27□□□□□ -1.73
UPF2Q9HAU5 AC025260.1-201ENST00000548858 430 ntBASIC4.27□□□□□ -1.73
UPF2Q9HAU5 AC023813.2-201ENST00000564321 469 ntBASIC4.27□□□□□ -1.73
UPF2Q9HAU5 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.27□□□□□ -1.73
UPF2Q9HAU5 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
UPF2Q9HAU5 MTCO1P40-201ENST00000574371 625 ntBASIC4.27□□□□□ -1.73
UPF2Q9HAU5 AC087499.8-201ENST00000578406 226 ntBASIC4.27□□□□□ -1.73
UPF2Q9HAU5 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.27□□□□□ -1.73
UPF2Q9HAU5 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.27□□□□□ -1.73
UPF2Q9HAU5 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms