Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.7□□□□□ -1.66
SMOQ99835 MIR6758-201ENST00000620653 63 ntBASIC4.7□□□□□ -1.66
SMOQ99835 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
SMOQ99835 RNU6-156P-201ENST00000621869 107 ntBASIC4.7□□□□□ -1.66
SMOQ99835 MIR6810-201ENST00000622701 70 ntBASIC4.7□□□□□ -1.66
SMOQ99835 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.7□□□□□ -1.66
SMOQ99835 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SMOQ99835 XPOTP1-201ENST00000443317 2398 ntBASIC4.7□□□□□ -1.66
SMOQ99835 AP002907.1-201ENST00000606361 1430 ntBASIC4.7□□□□□ -1.66
SMOQ99835 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SMOQ99835 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SMOQ99835 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SMOQ99835 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.69□□□□□ -1.66
SMOQ99835 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.69□□□□□ -1.66
SMOQ99835 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SMOQ99835 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SMOQ99835 RNA5SP391-201ENST00000363456 119 ntBASIC4.69□□□□□ -1.66
SMOQ99835 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SMOQ99835 SNORA40.3-201ENST00000390964 122 ntBASIC4.69□□□□□ -1.66
SMOQ99835 RNU6-248P-201ENST00000410720 107 ntBASIC4.69□□□□□ -1.66
SMOQ99835 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.69□□□□□ -1.66
SMOQ99835 RPL6P29-201ENST00000414863 865 ntBASIC4.69□□□□□ -1.66
SMOQ99835 MTND1P23-201ENST00000416931 372 ntBASIC4.69□□□□□ -1.66
SMOQ99835 CHIAP3-201ENST00000423668 1133 ntBASIC4.69□□□□□ -1.66
SMOQ99835 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.69□□□□□ -1.66
SMOQ99835 AL031736.2-201ENST00000426573 787 ntBASIC4.69□□□□□ -1.66
SMOQ99835 AC092017.2-201ENST00000427600 362 ntBASIC4.69□□□□□ -1.66
SMOQ99835 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.69□□□□□ -1.66
SMOQ99835 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SMOQ99835 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SMOQ99835 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SMOQ99835 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.69□□□□□ -1.66
SMOQ99835 RPS7P7-201ENST00000463499 571 ntBASIC4.69□□□□□ -1.66
SMOQ99835 KLF3P2-201ENST00000465138 268 ntBASIC4.69□□□□□ -1.66
SMOQ99835 AC017015.1-201ENST00000477387 286 ntBASIC4.69□□□□□ -1.66
SMOQ99835 AC114981.1-201ENST00000503897 678 ntBASIC4.69□□□□□ -1.66
SMOQ99835 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.69□□□□□ -1.66
SMOQ99835 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SMOQ99835 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.69□□□□□ -1.66
SMOQ99835 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SMOQ99835 AC104986.1-201ENST00000517978 436 ntBASIC4.69□□□□□ -1.66
SMOQ99835 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.69□□□□□ -1.66
SMOQ99835 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.69□□□□□ -1.66
SMOQ99835 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.69□□□□□ -1.66
SMOQ99835 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.69□□□□□ -1.66
SMOQ99835 AGGF1P8-201ENST00000562979 1000 ntBASIC4.69□□□□□ -1.66
SMOQ99835 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.69□□□□□ -1.66
SMOQ99835 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.69□□□□□ -1.66
SMOQ99835 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.69□□□□□ -1.66
SMOQ99835 MIR544B-201ENST00000582372 78 ntBASIC4.69□□□□□ -1.66
SMOQ99835 PRELID3BP8-201ENST00000604148 295 ntBASIC4.69□□□□□ -1.66
SMOQ99835 AC008966.2-201ENST00000606157 453 ntBASIC4.69□□□□□ -1.66
SMOQ99835 AC010857.1-201ENST00000606398 594 ntBASIC4.69□□□□□ -1.66
SMOQ99835 AC007684.1-201ENST00000609671 477 ntBASIC4.69□□□□□ -1.66
SMOQ99835 AC078899.5-201ENST00000612475 178 ntBASIC4.69□□□□□ -1.66
SMOQ99835 AC104010.1-201ENST00000616889 150 ntBASIC4.69□□□□□ -1.66
SMOQ99835 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.69□□□□□ -1.66
SMOQ99835 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SMOQ99835 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SMOQ99835 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SMOQ99835 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SMOQ99835 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SMOQ99835 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.69□□□□□ -1.66
SMOQ99835 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.68□□□□□ -1.66
SMOQ99835 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
SMOQ99835 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
SMOQ99835 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.68□□□□□ -1.66
SMOQ99835 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SMOQ99835 OR5P1P-201ENST00000299512 925 ntBASIC4.68□□□□□ -1.66
SMOQ99835 RNA5SP509-201ENST00000364577 119 ntBASIC4.68□□□□□ -1.66
SMOQ99835 MIR649-201ENST00000384843 97 ntBASIC4.68□□□□□ -1.66
SMOQ99835 SNORA68.2-201ENST00000391263 128 ntBASIC4.68□□□□□ -1.66
SMOQ99835 DHFRP6-201ENST00000401776 268 ntBASIC4.68□□□□□ -1.66
SMOQ99835 HMGB1P17-201ENST00000403495 628 ntBASIC4.68□□□□□ -1.66
SMOQ99835 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SMOQ99835 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.68□□□□□ -1.66
SMOQ99835 MIR548F1-201ENST00000408667 84 ntBASIC4.68□□□□□ -1.66
SMOQ99835 RNU4-25P-201ENST00000410569 230 ntBASIC4.68□□□□□ -1.66
SMOQ99835 AC004690.1-201ENST00000418216 328 ntBASIC4.68□□□□□ -1.66
SMOQ99835 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.68□□□□□ -1.66
SMOQ99835 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SMOQ99835 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.68□□□□□ -1.66
SMOQ99835 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.68□□□□□ -1.66
SMOQ99835 AL450263.2-201ENST00000439400 589 ntBASIC4.68□□□□□ -1.66
SMOQ99835 CBX1P1-201ENST00000440184 427 ntBASIC4.68□□□□□ -1.66
SMOQ99835 PDSS1P2-201ENST00000449397 678 ntBASIC4.68□□□□□ -1.66
SMOQ99835 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.68□□□□□ -1.66
SMOQ99835 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.68□□□□□ -1.66
SMOQ99835 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.68□□□□□ -1.66
SMOQ99835 RPL30P11-201ENST00000495304 339 ntBASIC4.68□□□□□ -1.66
SMOQ99835 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.68□□□□□ -1.66
SMOQ99835 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.68□□□□□ -1.66
SMOQ99835 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.68□□□□□ -1.66
SMOQ99835 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.68□□□□□ -1.66
SMOQ99835 POU5F1P7-201ENST00000508759 541 ntBASIC4.68□□□□□ -1.66
SMOQ99835 AC015795.1-201ENST00000513669 327 ntBASIC4.68□□□□□ -1.66
SMOQ99835 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.68□□□□□ -1.66
SMOQ99835 OR5M7P-201ENST00000526140 972 ntBASIC4.68□□□□□ -1.66
SMOQ99835 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.68□□□□□ -1.66
SMOQ99835 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms