Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC3.65□□□□□ -1.83
ABCA3Q99758 AC134882.1-201ENST00000603738 1676 ntBASIC3.65□□□□□ -1.83
ABCA3Q99758 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ABCA3Q99758 SNORD56.3-201ENST00000363507 71 ntBASIC3.64□□□□□ -1.83
ABCA3Q99758 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.64□□□□□ -1.83
ABCA3Q99758 AC234781.4-201ENST00000419384 244 ntBASIC3.64□□□□□ -1.83
ABCA3Q99758 MIR2114-201ENST00000516645 80 ntBASIC3.64□□□□□ -1.83
ABCA3Q99758 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.64□□□□□ -1.83
ABCA3Q99758 AC078899.3-201ENST00000599065 212 ntBASIC3.64□□□□□ -1.83
ABCA3Q99758 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.64□□□□□ -1.83
ABCA3Q99758 AL591516.1-201ENST00000611326 274 ntBASIC3.64□□□□□ -1.83
ABCA3Q99758 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
ABCA3Q99758 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
ABCA3Q99758 AC092079.1-201ENST00000558620 1985 ntBASIC3.64□□□□□ -1.83
ABCA3Q99758 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
ABCA3Q99758 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
ABCA3Q99758 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ABCA3Q99758 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
ABCA3Q99758 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.64□□□□□ -1.83
ABCA3Q99758 AL049610.1-201ENST00000423374 372 ntBASIC3.64□□□□□ -1.83
ABCA3Q99758 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.64□□□□□ -1.83
ABCA3Q99758 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.64□□□□□ -1.83
ABCA3Q99758 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.64□□□□□ -1.83
ABCA3Q99758 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.64□□□□□ -1.83
ABCA3Q99758 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.64□□□□□ -1.83
ABCA3Q99758 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.64□□□□□ -1.83
ABCA3Q99758 RPL7P12-201ENST00000446719 750 ntBASIC3.64□□□□□ -1.83
ABCA3Q99758 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.64□□□□□ -1.83
ABCA3Q99758 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC3.64□□□□□ -1.83
ABCA3Q99758 UBTFL10-201ENST00000528532 562 ntBASIC3.64□□□□□ -1.83
ABCA3Q99758 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.64□□□□□ -1.83
ABCA3Q99758 AC007621.1-201ENST00000604544 437 ntBASIC3.64□□□□□ -1.83
ABCA3Q99758 AC079228.1-201ENST00000624774 1049 ntBASIC3.64□□□□□ -1.83
ABCA3Q99758 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ABCA3Q99758 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
ABCA3Q99758 AL139415.2-201ENST00000431968 163 ntBASIC3.63□□□□□ -1.83
ABCA3Q99758 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.63□□□□□ -1.83
ABCA3Q99758 AL357520.1-201ENST00000441557 453 ntBASIC3.63□□□□□ -1.83
ABCA3Q99758 RPS4XP6-201ENST00000477670 797 ntBASIC3.63□□□□□ -1.83
ABCA3Q99758 AC135999.1-201ENST00000478962 479 ntBASIC3.63□□□□□ -1.83
ABCA3Q99758 AC132942.1-201ENST00000486753 483 ntBASIC3.63□□□□□ -1.83
ABCA3Q99758 AC078817.1-201ENST00000492623 435 ntBASIC3.63□□□□□ -1.83
ABCA3Q99758 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
ABCA3Q99758 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.63□□□□□ -1.83
ABCA3Q99758 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.63□□□□□ -1.83
ABCA3Q99758 AC107918.3-201ENST00000533272 382 ntBASIC3.63□□□□□ -1.83
ABCA3Q99758 AL355493.4-201ENST00000618530 292 ntBASIC3.63□□□□□ -1.83
ABCA3Q99758 AP002967.1-201ENST00000624203 539 ntBASIC3.63□□□□□ -1.83
ABCA3Q99758 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.63□□□□□ -1.83
ABCA3Q99758 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.63□□□□□ -1.83
ABCA3Q99758 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
ABCA3Q99758 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
ABCA3Q99758 BTF3P7-201ENST00000407097 488 ntBASIC3.62□□□□□ -1.83
ABCA3Q99758 RNA5SP425-201ENST00000410336 112 ntBASIC3.62□□□□□ -1.83
ABCA3Q99758 MTCO1P51-201ENST00000427672 1060 ntBASIC3.62□□□□□ -1.83
ABCA3Q99758 HMGN2P3-201ENST00000433603 273 ntBASIC3.62□□□□□ -1.83
ABCA3Q99758 HMGN2P5-201ENST00000436882 273 ntBASIC3.62□□□□□ -1.83
ABCA3Q99758 RN7SL633P-201ENST00000488974 297 ntBASIC3.62□□□□□ -1.83
ABCA3Q99758 RN7SKP31-201ENST00000516354 278 ntBASIC3.62□□□□□ -1.83
ABCA3Q99758 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.62□□□□□ -1.83
ABCA3Q99758 AC025811.1-201ENST00000604312 472 ntBASIC3.62□□□□□ -1.83
ABCA3Q99758 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.62□□□□□ -1.83
ABCA3Q99758 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ABCA3Q99758 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
ABCA3Q99758 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.62□□□□□ -1.83
ABCA3Q99758 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ABCA3Q99758 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ABCA3Q99758 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.61□□□□□ -1.83
ABCA3Q99758 BX276092.3-201ENST00000424182 230 ntBASIC3.61□□□□□ -1.83
ABCA3Q99758 RPS26P40-201ENST00000435209 294 ntBASIC3.61□□□□□ -1.83
ABCA3Q99758 UBE2D3P1-201ENST00000436669 444 ntBASIC3.61□□□□□ -1.83
ABCA3Q99758 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.61□□□□□ -1.83
ABCA3Q99758 AL513043.1-201ENST00000439124 535 ntBASIC3.61□□□□□ -1.83
ABCA3Q99758 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.61□□□□□ -1.83
ABCA3Q99758 AC133134.1-201ENST00000466800 359 ntBASIC3.61□□□□□ -1.83
ABCA3Q99758 AC108210.2-201ENST00000503681 201 ntBASIC3.61□□□□□ -1.83
ABCA3Q99758 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.61□□□□□ -1.83
ABCA3Q99758 MTCYBP19-201ENST00000517463 1124 ntBASIC3.61□□□□□ -1.83
ABCA3Q99758 AC019227.1-201ENST00000526902 510 ntBASIC3.61□□□□□ -1.83
ABCA3Q99758 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ABCA3Q99758 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
ABCA3Q99758 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.61□□□□□ -1.83
ABCA3Q99758 MTCO1P9-201ENST00000505577 1534 ntBASIC3.61□□□□□ -1.83
ABCA3Q99758 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
ABCA3Q99758 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ABCA3Q99758 RNU1-75P-201ENST00000347264 129 ntBASIC3.61□□□□□ -1.83
ABCA3Q99758 SNORD62.1-201ENST00000362541 86 ntBASIC3.61□□□□□ -1.83
ABCA3Q99758 RNU6-984P-201ENST00000363236 109 ntBASIC3.61□□□□□ -1.83
ABCA3Q99758 RNU6-482P-201ENST00000391068 107 ntBASIC3.61□□□□□ -1.83
ABCA3Q99758 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ABCA3Q99758 AL365396.1-201ENST00000430854 671 ntBASIC3.61□□□□□ -1.83
ABCA3Q99758 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.61□□□□□ -1.83
ABCA3Q99758 IGKV2D-23-201ENST00000518179 286 ntBASIC3.61□□□□□ -1.83
ABCA3Q99758 RPL7P20-201ENST00000520308 745 ntBASIC3.61□□□□□ -1.83
ABCA3Q99758 RFPL1S-203ENST00000539579 330 ntBASIC3.61□□□□□ -1.83
ABCA3Q99758 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ABCA3Q99758 AC025034.2-201ENST00000623264 286 ntBASIC3.61□□□□□ -1.83
ABCA3Q99758 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ABCA3Q99758 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ABCA3Q99758 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms