Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC092881.1-201ENST00000638218 2733 ntBASIC4.53□□□□□ -1.68
IFT140Q96RY7 HSPA8P4-201ENST00000511877 1920 ntBASIC4.52□□□□□ -1.69
IFT140Q96RY7 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
IFT140Q96RY7 CYCSP45-201ENST00000402289 315 ntBASIC4.52□□□□□ -1.69
IFT140Q96RY7 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.52□□□□□ -1.69
IFT140Q96RY7 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.52□□□□□ -1.69
IFT140Q96RY7 FABP5P12-201ENST00000515543 389 ntBASIC4.52□□□□□ -1.69
IFT140Q96RY7 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.52□□□□□ -1.69
IFT140Q96RY7 AC025946.2-201ENST00000603398 234 ntBASIC4.52□□□□□ -1.69
IFT140Q96RY7 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.52□□□□□ -1.69
IFT140Q96RY7 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
IFT140Q96RY7 AC004925.1-201ENST00000624256 2706 ntBASIC4.51□□□□□ -1.69
IFT140Q96RY7 BX679664.1-201ENST00000434429 253 ntBASIC4.51□□□□□ -1.69
IFT140Q96RY7 RNU6-548P-201ENST00000517083 115 ntBASIC4.51□□□□□ -1.69
IFT140Q96RY7 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.51□□□□□ -1.69
IFT140Q96RY7 AL356490.1-201ENST00000623079 479 ntBASIC4.51□□□□□ -1.69
IFT140Q96RY7 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.51□□□□□ -1.69
IFT140Q96RY7 AC007336.1-201ENST00000576365 3828 ntBASIC4.51□□□□□ -1.69
IFT140Q96RY7 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
IFT140Q96RY7 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.5□□□□□ -1.69
IFT140Q96RY7 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
IFT140Q96RY7 RNU4-26P-201ENST00000410270 107 ntBASIC4.5□□□□□ -1.69
IFT140Q96RY7 RPL23AP4-201ENST00000427757 463 ntBASIC4.5□□□□□ -1.69
IFT140Q96RY7 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
IFT140Q96RY7 AC010401.1-201ENST00000463867 348 ntBASIC4.5□□□□□ -1.69
IFT140Q96RY7 AC105918.1-201ENST00000474399 838 ntBASIC4.5□□□□□ -1.69
IFT140Q96RY7 RN7SL633P-201ENST00000488974 297 ntBASIC4.5□□□□□ -1.69
IFT140Q96RY7 AF186190.1-201ENST00000517470 480 ntBASIC4.5□□□□□ -1.69
IFT140Q96RY7 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.5□□□□□ -1.69
IFT140Q96RY7 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
IFT140Q96RY7 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.5□□□□□ -1.69
IFT140Q96RY7 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.49□□□□□ -1.69
IFT140Q96RY7 RAC1P3-201ENST00000416129 580 ntBASIC4.49□□□□□ -1.69
IFT140Q96RY7 AL356320.1-201ENST00000429616 163 ntBASIC4.49□□□□□ -1.69
IFT140Q96RY7 AC112220.1-201ENST00000434628 355 ntBASIC4.49□□□□□ -1.69
IFT140Q96RY7 AC009263.1-201ENST00000441193 1239 ntBASIC4.49□□□□□ -1.69
IFT140Q96RY7 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.49□□□□□ -1.69
IFT140Q96RY7 RPS27AP9-201ENST00000477681 438 ntBASIC4.49□□□□□ -1.69
IFT140Q96RY7 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.49□□□□□ -1.69
IFT140Q96RY7 AP003102.1-201ENST00000525638 661 ntBASIC4.49□□□□□ -1.69
IFT140Q96RY7 AC011602.1-201ENST00000546484 331 ntBASIC4.49□□□□□ -1.69
IFT140Q96RY7 AC009977.1-201ENST00000586015 570 ntBASIC4.49□□□□□ -1.69
IFT140Q96RY7 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
IFT140Q96RY7 AL031985.3-201ENST00000565390 2449 ntBASIC4.49□□□□□ -1.69
IFT140Q96RY7 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
IFT140Q96RY7 LINC01355-201ENST00000566551 5444 ntBASIC4.49□□□□□ -1.69
IFT140Q96RY7 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
IFT140Q96RY7 AL049555.1-201ENST00000562834 1933 ntBASIC4.49□□□□□ -1.69
IFT140Q96RY7 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
IFT140Q96RY7 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.49□□□□□ -1.69
IFT140Q96RY7 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
IFT140Q96RY7 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.49□□□□□ -1.69
IFT140Q96RY7 AC003982.1-202ENST00000469928 248 ntBASIC4.49□□□□□ -1.69
IFT140Q96RY7 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.49□□□□□ -1.69
IFT140Q96RY7 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.49□□□□□ -1.69
IFT140Q96RY7 FAM60DP-201ENST00000524174 632 ntBASIC4.49□□□□□ -1.69
IFT140Q96RY7 AC243972.3-201ENST00000539655 198 ntBASIC4.49□□□□□ -1.69
IFT140Q96RY7 AL392112.1-201ENST00000605115 829 ntBASIC4.49□□□□□ -1.69
IFT140Q96RY7 AC078899.5-201ENST00000612475 178 ntBASIC4.49□□□□□ -1.69
IFT140Q96RY7 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
IFT140Q96RY7 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
IFT140Q96RY7 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.48□□□□□ -1.69
IFT140Q96RY7 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
IFT140Q96RY7 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
IFT140Q96RY7 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
IFT140Q96RY7 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
IFT140Q96RY7 RPL32P35-201ENST00000415214 394 ntBASIC4.48□□□□□ -1.69
IFT140Q96RY7 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC4.48□□□□□ -1.69
IFT140Q96RY7 TRGV5P-201ENST00000419915 354 ntBASIC4.48□□□□□ -1.69
IFT140Q96RY7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC4.48□□□□□ -1.69
IFT140Q96RY7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC4.48□□□□□ -1.69
IFT140Q96RY7 SRIP1-201ENST00000489235 288 ntBASIC4.48□□□□□ -1.69
IFT140Q96RY7 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.48□□□□□ -1.69
IFT140Q96RY7 AC092436.1-201ENST00000506450 503 ntBASIC4.48□□□□□ -1.69
IFT140Q96RY7 AC079228.1-201ENST00000624774 1049 ntBASIC4.48□□□□□ -1.69
IFT140Q96RY7 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.48□□□□□ -1.69
IFT140Q96RY7 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
IFT140Q96RY7 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
IFT140Q96RY7 RPL30P2-201ENST00000414021 291 ntBASIC4.47□□□□□ -1.69
IFT140Q96RY7 GAPDHP39-201ENST00000481866 979 ntBASIC4.47□□□□□ -1.69
IFT140Q96RY7 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.47□□□□□ -1.69
IFT140Q96RY7 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.47□□□□□ -1.69
IFT140Q96RY7 AC131238.1-201ENST00000617135 328 ntBASIC4.47□□□□□ -1.69
IFT140Q96RY7 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
IFT140Q96RY7 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
IFT140Q96RY7 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
IFT140Q96RY7 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.46□□□□□ -1.69
IFT140Q96RY7 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
IFT140Q96RY7 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.46□□□□□ -1.7
IFT140Q96RY7 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
IFT140Q96RY7 AL031736.2-201ENST00000426573 787 ntBASIC4.46□□□□□ -1.7
IFT140Q96RY7 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.46□□□□□ -1.7
IFT140Q96RY7 FAM103A2P-201ENST00000444122 354 ntBASIC4.46□□□□□ -1.7
IFT140Q96RY7 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.46□□□□□ -1.7
IFT140Q96RY7 AC112184.1-201ENST00000505179 312 ntBASIC4.46□□□□□ -1.7
IFT140Q96RY7 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.46□□□□□ -1.7
IFT140Q96RY7 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.46□□□□□ -1.7
IFT140Q96RY7 AC104027.1-201ENST00000521887 300 ntBASIC4.46□□□□□ -1.7
IFT140Q96RY7 AC009063.1-201ENST00000563342 702 ntBASIC4.46□□□□□ -1.7
IFT140Q96RY7 NTAN1P1-201ENST00000603150 646 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms