Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
VPS33AQ96AX1 LINC00561-201ENST00000565815 2738 ntBASIC3.9□□□□□ -1.79
VPS33AQ96AX1 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.9□□□□□ -1.79
VPS33AQ96AX1 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS33AQ96AX1 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS33AQ96AX1 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.89□□□□□ -1.79
VPS33AQ96AX1 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.89□□□□□ -1.79
VPS33AQ96AX1 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VPS33AQ96AX1 SNORD35B-201ENST00000363660 87 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 RN7SKP103-201ENST00000363848 320 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VPS33AQ96AX1 MIR323B-201ENST00000385269 82 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 RPS16P5-201ENST00000406501 404 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 RNU6-712P-201ENST00000410558 100 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 RNU2-15P-201ENST00000410692 191 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 RNU2-71P-201ENST00000411395 189 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.89□□□□□ -1.79
VPS33AQ96AX1 AL590139.1-201ENST00000416267 400 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.89□□□□□ -1.79
VPS33AQ96AX1 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS33AQ96AX1 AL592293.2-201ENST00000422292 996 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 GLRXP1-201ENST00000423261 334 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 AL049610.1-201ENST00000423374 372 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 RPL21P66-201ENST00000426566 466 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.89□□□□□ -1.79
VPS33AQ96AX1 RPS3AP54-201ENST00000435535 734 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 CYCSP43-201ENST00000438233 310 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 AC006466.1-201ENST00000438721 289 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS33AQ96AX1 AC239367.2-201ENST00000447309 705 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 TRGVB-201ENST00000453257 471 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 OFD1P3Y-201ENST00000453312 783 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 AC005410.1-202ENST00000460347 485 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
VPS33AQ96AX1 AC087312.1-201ENST00000471411 480 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 MTCO3P35-201ENST00000485582 781 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 AC007686.1-201ENST00000488511 463 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.89□□□□□ -1.79
VPS33AQ96AX1 TRAV31-201ENST00000502780 342 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 AK3P4-201ENST00000504283 583 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.89□□□□□ -1.79
VPS33AQ96AX1 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.89□□□□□ -1.79
VPS33AQ96AX1 AC008958.1-201ENST00000511047 682 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 AC010342.1-201ENST00000514047 877 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 RN7SKP92-201ENST00000517266 244 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS33AQ96AX1 OR4P1P-201ENST00000530808 1136 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS33AQ96AX1 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS33AQ96AX1 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VPS33AQ96AX1 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS33AQ96AX1 TVP23BP1-201ENST00000557500 617 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS33AQ96AX1 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.89□□□□□ -1.79
VPS33AQ96AX1 XIAPP1-201ENST00000603162 600 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 AC011816.2-201ENST00000607089 556 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.89□□□□□ -1.79
VPS33AQ96AX1 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS33AQ96AX1 AC090912.3-201ENST00000609775 533 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 AC012531.5-201ENST00000611375 151 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 AC100827.5-201ENST00000615883 426 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.89□□□□□ -1.79
VPS33AQ96AX1 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS33AQ96AX1 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.89□□□□□ -1.79
VPS33AQ96AX1 AC109809.1-201ENST00000619665 545 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 AC018755.4-201ENST00000619715 454 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 AC091925.2-201ENST00000625059 256 ntBASIC3.89□□□□□ -1.79
VPS33AQ96AX1 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.89□□□□□ -1.79
VPS33AQ96AX1 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.89□□□□□ -1.79
VPS33AQ96AX1 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS33AQ96AX1 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
VPS33AQ96AX1 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS33AQ96AX1 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VPS33AQ96AX1 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS33AQ96AX1 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VPS33AQ96AX1 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
VPS33AQ96AX1 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
VPS33AQ96AX1 IPO8P1-201ENST00000455509 3109 ntBASIC3.88□□□□□ -1.79
VPS33AQ96AX1 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VPS33AQ96AX1 Y_RNA.408-201ENST00000383987 102 ntBASIC3.88□□□□□ -1.79
VPS33AQ96AX1 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.88□□□□□ -1.79
VPS33AQ96AX1 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS33AQ96AX1 AL159169.1-201ENST00000421119 127 ntBASIC3.88□□□□□ -1.79
VPS33AQ96AX1 AL358472.1-201ENST00000431295 329 ntBASIC3.88□□□□□ -1.79
VPS33AQ96AX1 MTND4P6-201ENST00000438297 472 ntBASIC3.88□□□□□ -1.79
VPS33AQ96AX1 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS33AQ96AX1 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS33AQ96AX1 HMGN2P7-201ENST00000456186 273 ntBASIC3.88□□□□□ -1.79
VPS33AQ96AX1 SUMO2P2-201ENST00000456482 255 ntBASIC3.88□□□□□ -1.79
VPS33AQ96AX1 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS33AQ96AX1 RPL23AP24-201ENST00000458203 385 ntBASIC3.88□□□□□ -1.79
VPS33AQ96AX1 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS33AQ96AX1 PPIAP15-201ENST00000479662 484 ntBASIC3.88□□□□□ -1.79
VPS33AQ96AX1 RN7SL271P-201ENST00000487601 295 ntBASIC3.88□□□□□ -1.79
VPS33AQ96AX1 AC093720.1-201ENST00000505681 714 ntBASIC3.88□□□□□ -1.79
VPS33AQ96AX1 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS33AQ96AX1 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS33AQ96AX1 SNORA70.14-201ENST00000516205 110 ntBASIC3.88□□□□□ -1.79
VPS33AQ96AX1 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms