Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
ALMS1Q8TCU4 AL136964.1-201ENST00000622038 2990 ntBASIC1.98□□□□□ -2.09
ALMS1Q8TCU4 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC1.98□□□□□ -2.09
ALMS1Q8TCU4 MIR1289-2-201ENST00000408360 111 ntBASIC1.98□□□□□ -2.09
ALMS1Q8TCU4 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC1.98□□□□□ -2.09
ALMS1Q8TCU4 RPL23AP62-201ENST00000463396 453 ntBASIC1.98□□□□□ -2.09
ALMS1Q8TCU4 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC1.98□□□□□ -2.09
ALMS1Q8TCU4 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC1.98□□□□□ -2.09
ALMS1Q8TCU4 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
ALMS1Q8TCU4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
ALMS1Q8TCU4 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
ALMS1Q8TCU4 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
ALMS1Q8TCU4 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC1.98□□□□□ -2.09
ALMS1Q8TCU4 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.98□□□□□ -2.09
ALMS1Q8TCU4 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
ALMS1Q8TCU4 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC1.98□□□□□ -2.09
ALMS1Q8TCU4 AC103710.3-201ENST00000608157 948 ntBASIC1.98□□□□□ -2.09
ALMS1Q8TCU4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC1.98□□□□□ -2.09
ALMS1Q8TCU4 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
ALMS1Q8TCU4 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC1.98□□□□□ -2.09
ALMS1Q8TCU4 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC1.98□□□□□ -2.09
ALMS1Q8TCU4 KLHL2P1-201ENST00000508691 521 ntBASIC1.98□□□□□ -2.09
ALMS1Q8TCU4 RFPL4AP3-201ENST00000515267 345 ntBASIC1.98□□□□□ -2.09
ALMS1Q8TCU4 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC1.98□□□□□ -2.09
ALMS1Q8TCU4 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
ALMS1Q8TCU4 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
ALMS1Q8TCU4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
ALMS1Q8TCU4 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 U3.42-201ENST00000408746 214 ntBASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 AL356968.1-201ENST00000416622 474 ntBASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 AL162389.1-201ENST00000449233 177 ntBASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 UBL5P3-201ENST00000475112 231 ntBASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 TRBV8-2-201ENST00000475637 270 ntBASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 NPM1P35-201ENST00000533043 868 ntBASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 SNORA9.2-201ENST00000365361 133 ntBASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 AC105402.1-201ENST00000413336 545 ntBASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 AL603825.1-201ENST00000438481 80 ntBASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 Z99127.3-201ENST00000448158 395 ntBASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 AC008565.1-201ENST00000509046 885 ntBASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 RGS4-207ENST00000527809 817 ntTSL 4 BASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 MIR5047-201ENST00000579212 100 ntBASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 MTCO1P9-201ENST00000505577 1534 ntBASIC1.97□□□□□ -2.09
ALMS1Q8TCU4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
ALMS1Q8TCU4 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC1.96□□□□□ -2.09
ALMS1Q8TCU4 HSPA8P4-201ENST00000511877 1920 ntBASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 SNORD56.3-201ENST00000363507 71 ntBASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 AL137014.1-201ENST00000420490 1226 ntBASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 IGKV2-36-201ENST00000519999 223 ntBASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 AL139415.2-201ENST00000431968 163 ntBASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 IFNA11P-201ENST00000446352 526 ntBASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 RPL7P12-201ENST00000446719 750 ntBASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 AC008280.2-201ENST00000455473 307 ntBASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 AC078899.3-201ENST00000599065 212 ntBASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 SNORA62.2-201ENST00000364672 152 ntBASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 AL590103.1-201ENST00000434488 307 ntBASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 SNORA31.21-201ENST00000517180 77 ntBASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 AC064859.1-201ENST00000624741 174 ntBASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 ZNF542P-204ENST00000482727 1305 ntBASIC1.96□□□□□ -2.1
ALMS1Q8TCU4 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms