Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 RNU6-150P-201ENST00000516237 95 ntBASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 RNU6-864P-201ENST00000516256 108 ntBASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 RNU6-1088P-201ENST00000516850 104 ntBASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 Y_RNA.721-201ENST00000517207 102 ntBASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 RPL7P20-201ENST00000520308 745 ntBASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 HAUS8P1-201ENST00000549005 542 ntBASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 AC127381.1-201ENST00000555979 939 ntBASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 uc_338.7-201ENST00000621834 124 ntBASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 DBF4P1-201ENST00000412976 1892 ntBASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 VPS35P1-201ENST00000563400 1518 ntBASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 AL442128.2-201ENST00000620246 1824 ntBASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 AP004289.2-201ENST00000444413 1457 ntBASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 AL049641.1-201ENST00000441055 1948 ntBASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 NAMPTP1-201ENST00000440465 2514 ntBASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 AC092681.1-201ENST00000297369 291 ntBASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 RN7SKP185-201ENST00000362813 326 ntBASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 RNU6-582P-201ENST00000362989 107 ntBASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 MFF-206ENST00000392059 1710 ntTSL 5 BASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 RBMY2KP-201ENST00000418221 992 ntBASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 AL136380.1-201ENST00000447970 162 ntBASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 TRGVB-201ENST00000453257 471 ntBASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 RNU7-63P-201ENST00000459054 62 ntBASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 TMEM248P1-201ENST00000510579 951 ntBASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 RNY3P15-201ENST00000516297 97 ntBASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 RNU6-255P-201ENST00000516957 105 ntBASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 AP001804.3-201ENST00000525146 880 ntBASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 AC023157.2-201ENST00000540596 141 ntBASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 MIR3942-201ENST00000585264 109 ntBASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 AC025857.2-201ENST00000602711 238 ntBASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 AC104695.3-201ENST00000604052 296 ntBASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 AC114546.3-201ENST00000623582 1734 ntBASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 AC015799.1-201ENST00000622996 3122 ntBASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 PNPT1P2-201ENST00000456768 2050 ntBASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 RNF6P1-201ENST00000444889 1784 ntBASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 AC114774.1-201ENST00000507410 1770 ntBASIC6.29□□□□□ -1.4
NEDD1Q8NHV4 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.28□□□□□ -1.4
NEDD1Q8NHV4 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NEDD1Q8NHV4 AP000432.2-201ENST00000624164 2048 ntBASIC6.28□□□□□ -1.4
NEDD1Q8NHV4 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.28□□□□□ -1.4
NEDD1Q8NHV4 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NEDD1Q8NHV4 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.28□□□□□ -1.4
NEDD1Q8NHV4 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
NEDD1Q8NHV4 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NEDD1Q8NHV4 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NEDD1Q8NHV4 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NEDD1Q8NHV4 RNU6-492P-201ENST00000363035 104 ntBASIC6.28□□□□□ -1.4
NEDD1Q8NHV4 RNU1-43P-201ENST00000365052 165 ntBASIC6.28□□□□□ -1.4
NEDD1Q8NHV4 RNY1P14-201ENST00000384426 108 ntBASIC6.28□□□□□ -1.4
NEDD1Q8NHV4 Y_RNA.645-201ENST00000391229 102 ntBASIC6.28□□□□□ -1.4
NEDD1Q8NHV4 DUTP5-201ENST00000406790 469 ntBASIC6.28□□□□□ -1.4
NEDD1Q8NHV4 MIR1305-201ENST00000408300 86 ntBASIC6.28□□□□□ -1.4
NEDD1Q8NHV4 AL450992.3-201ENST00000413192 568 ntBASIC6.28□□□□□ -1.4
NEDD1Q8NHV4 COX6CP17-201ENST00000421389 185 ntBASIC6.28□□□□□ -1.4
NEDD1Q8NHV4 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC6.28□□□□□ -1.4
NEDD1Q8NHV4 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.28□□□□□ -1.4
NEDD1Q8NHV4 OR2AS1P-201ENST00000427827 319 ntBASIC6.28□□□□□ -1.4
NEDD1Q8NHV4 BRWD1P3-201ENST00000428816 390 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms