Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AC092628.2-201ENST00000622492 339 ntBASIC3.31□□□□□ -1.88
BEST4Q8NFU0 MKKS-204ENST00000639674 192 ntBASIC3.31□□□□□ -1.88
BEST4Q8NFU0 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
BEST4Q8NFU0 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
BEST4Q8NFU0 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
BEST4Q8NFU0 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
BEST4Q8NFU0 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
BEST4Q8NFU0 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
BEST4Q8NFU0 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
BEST4Q8NFU0 MTND5P28-201ENST00000438005 1594 ntBASIC3.3□□□□□ -1.88
BEST4Q8NFU0 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
BEST4Q8NFU0 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
BEST4Q8NFU0 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
BEST4Q8NFU0 AC107982.1-201ENST00000507171 1300 ntBASIC3.3□□□□□ -1.88
BEST4Q8NFU0 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
BEST4Q8NFU0 RNU4-92P-201ENST00000363783 136 ntBASIC3.3□□□□□ -1.88
BEST4Q8NFU0 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
BEST4Q8NFU0 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
BEST4Q8NFU0 SUGT1P1-201ENST00000379514 476 ntBASIC3.3□□□□□ -1.88
BEST4Q8NFU0 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.3□□□□□ -1.88
BEST4Q8NFU0 SSXP10-201ENST00000402595 565 ntBASIC3.3□□□□□ -1.88
BEST4Q8NFU0 RNU6-757P-201ENST00000410334 100 ntBASIC3.3□□□□□ -1.88
BEST4Q8NFU0 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.3□□□□□ -1.88
BEST4Q8NFU0 HIGD1AP15-201ENST00000416198 280 ntBASIC3.3□□□□□ -1.88
BEST4Q8NFU0 COX6CP15-201ENST00000426313 211 ntBASIC3.3□□□□□ -1.88
BEST4Q8NFU0 AC096632.1-201ENST00000427395 310 ntBASIC3.3□□□□□ -1.88
BEST4Q8NFU0 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.3□□□□□ -1.88
BEST4Q8NFU0 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.3□□□□□ -1.88
BEST4Q8NFU0 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.3□□□□□ -1.88
BEST4Q8NFU0 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.3□□□□□ -1.88
BEST4Q8NFU0 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.3□□□□□ -1.88
BEST4Q8NFU0 Z77249.1-201ENST00000444622 1175 ntBASIC3.3□□□□□ -1.88
BEST4Q8NFU0 RANP8-201ENST00000444720 713 ntBASIC3.3□□□□□ -1.88
BEST4Q8NFU0 VN1R10P-201ENST00000447106 875 ntBASIC3.3□□□□□ -1.88
BEST4Q8NFU0 HMGB3P8-201ENST00000449709 577 ntBASIC3.3□□□□□ -1.88
BEST4Q8NFU0 MRPS31P2-201ENST00000451581 518 ntBASIC3.3□□□□□ -1.88
BEST4Q8NFU0 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.3□□□□□ -1.88
BEST4Q8NFU0 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.3□□□□□ -1.88
BEST4Q8NFU0 AL139824.2-201ENST00000458731 1095 ntBASIC3.3□□□□□ -1.88
BEST4Q8NFU0 AC010468.1-201ENST00000461022 817 ntBASIC3.3□□□□□ -1.88
BEST4Q8NFU0 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.3□□□□□ -1.88
BEST4Q8NFU0 RN7SL860P-201ENST00000473738 223 ntBASIC3.3□□□□□ -1.88
BEST4Q8NFU0 AC010301.1-201ENST00000473936 355 ntBASIC3.3□□□□□ -1.88
BEST4Q8NFU0 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.3□□□□□ -1.88
BEST4Q8NFU0 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.3□□□□□ -1.88
BEST4Q8NFU0 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.3□□□□□ -1.88
BEST4Q8NFU0 MTCO3P44-201ENST00000510977 541 ntBASIC3.3□□□□□ -1.88
BEST4Q8NFU0 ARL2BPP6-201ENST00000512757 439 ntBASIC3.3□□□□□ -1.88
BEST4Q8NFU0 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.3□□□□□ -1.88
BEST4Q8NFU0 RN7SKP82-201ENST00000516786 223 ntBASIC3.3□□□□□ -1.88
BEST4Q8NFU0 RN7SKP60-201ENST00000516985 239 ntBASIC3.3□□□□□ -1.88
BEST4Q8NFU0 RNU6-1261P-201ENST00000517194 104 ntBASIC3.3□□□□□ -1.88
BEST4Q8NFU0 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.3□□□□□ -1.88
BEST4Q8NFU0 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
BEST4Q8NFU0 OR5AP1P-201ENST00000529730 940 ntBASIC3.3□□□□□ -1.88
BEST4Q8NFU0 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.3□□□□□ -1.88
BEST4Q8NFU0 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.3□□□□□ -1.88
BEST4Q8NFU0 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.3□□□□□ -1.88
BEST4Q8NFU0 MIR4425-201ENST00000580572 84 ntBASIC3.3□□□□□ -1.88
BEST4Q8NFU0 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.3□□□□□ -1.88
BEST4Q8NFU0 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.3□□□□□ -1.88
BEST4Q8NFU0 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.3□□□□□ -1.88
BEST4Q8NFU0 AL139344.1-201ENST00000605228 195 ntBASIC3.3□□□□□ -1.88
BEST4Q8NFU0 AL365503.1-201ENST00000605247 905 ntBASIC3.3□□□□□ -1.88
BEST4Q8NFU0 AC010680.4-201ENST00000605334 543 ntBASIC3.3□□□□□ -1.88
BEST4Q8NFU0 AC211433.2-201ENST00000608433 387 ntBASIC3.3□□□□□ -1.88
BEST4Q8NFU0 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.3□□□□□ -1.88
BEST4Q8NFU0 AP002791.1-201ENST00000623291 381 ntBASIC3.3□□□□□ -1.88
BEST4Q8NFU0 WDR75-207ENST00000631047 270 ntTSL 5 BASIC3.3□□□□□ -1.88
BEST4Q8NFU0 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.3□□□□□ -1.88
BEST4Q8NFU0 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
BEST4Q8NFU0 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
BEST4Q8NFU0 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
BEST4Q8NFU0 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
BEST4Q8NFU0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
BEST4Q8NFU0 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
BEST4Q8NFU0 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.29□□□□□ -1.88
BEST4Q8NFU0 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
BEST4Q8NFU0 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
BEST4Q8NFU0 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
BEST4Q8NFU0 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
BEST4Q8NFU0 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
BEST4Q8NFU0 RNA5SP399-201ENST00000364003 117 ntBASIC3.29□□□□□ -1.88
BEST4Q8NFU0 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
BEST4Q8NFU0 MIR124-3-201ENST00000384866 87 ntBASIC3.29□□□□□ -1.88
BEST4Q8NFU0 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
BEST4Q8NFU0 ARF4P3-201ENST00000397387 509 ntBASIC3.29□□□□□ -1.88
BEST4Q8NFU0 EIF5P1-201ENST00000400019 1231 ntBASIC3.29□□□□□ -1.88
BEST4Q8NFU0 AL121978.1-201ENST00000402778 359 ntBASIC3.29□□□□□ -1.88
BEST4Q8NFU0 RNU4-78P-201ENST00000410940 126 ntBASIC3.29□□□□□ -1.88
BEST4Q8NFU0 SNORA57.3-201ENST00000411095 141 ntBASIC3.29□□□□□ -1.88
BEST4Q8NFU0 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.29□□□□□ -1.88
BEST4Q8NFU0 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
BEST4Q8NFU0 AC119751.6-201ENST00000416712 186 ntBASIC3.29□□□□□ -1.88
BEST4Q8NFU0 RPS3AP9-201ENST00000417027 792 ntBASIC3.29□□□□□ -1.88
BEST4Q8NFU0 RPS15AP6-201ENST00000420703 385 ntBASIC3.29□□□□□ -1.88
BEST4Q8NFU0 RPL31P12-201ENST00000422587 358 ntBASIC3.29□□□□□ -1.88
BEST4Q8NFU0 AC092832.1-201ENST00000422934 400 ntBASIC3.29□□□□□ -1.88
BEST4Q8NFU0 XKRYP1-201ENST00000423438 492 ntBASIC3.29□□□□□ -1.88
BEST4Q8NFU0 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms