Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.45□□□□□ -1.54
SMC1BQ8NDV3 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 MTND4P4-201ENST00000439033 1366 ntBASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 RNU4-44P-201ENST00000363050 141 ntBASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 RNU6-984P-201ENST00000363236 109 ntBASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 RNU6-603P-201ENST00000411403 107 ntBASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 AL512649.1-201ENST00000428997 581 ntBASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 ZYG11AP1-201ENST00000430329 837 ntBASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 AL365184.2-201ENST00000431139 435 ntBASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 AC000374.1-201ENST00000434698 1745 ntBASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 VN1R10P-201ENST00000447106 875 ntBASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 TRGVB-201ENST00000453257 471 ntBASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 MTCO3P2-201ENST00000457365 171 ntBASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 AC114981.1-201ENST00000503897 678 ntBASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 AC135352.1-201ENST00000506173 1418 ntBASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 AC010460.1-201ENST00000507087 466 ntBASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 AC109458.1-201ENST00000508858 316 ntBASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 AL389895.1-201ENST00000554127 252 ntBASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 AC093249.4-201ENST00000564755 259 ntBASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 AC087683.1-201ENST00000591187 441 ntBASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 AC113403.1-201ENST00000604910 193 ntBASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 AC092354.2-201ENST00000607786 514 ntBASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 AC019176.2-201ENST00000611579 315 ntBASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 AC009509.4-201ENST00000619202 509 ntBASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 AC063976.2-201ENST00000425667 3556 ntBASIC5.44□□□□□ -1.54
SMC1BQ8NDV3 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 OR4G11P-202ENST00000642116 1414 ntBASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 FGF7P2-201ENST00000332473 296 ntBASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 RNU6-433P-201ENST00000363216 104 ntBASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 RNU6-921P-201ENST00000384361 107 ntBASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 RPL21P67-201ENST00000402896 478 ntBASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 HMGB1P11-201ENST00000413899 637 ntBASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 RPS7P13-201ENST00000413955 498 ntBASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 AC004448.2-201ENST00000422360 586 ntBASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 USP9YP14-201ENST00000430663 563 ntBASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 RPS24P1-201ENST00000438550 371 ntBASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 UBE2V1P3-201ENST00000439651 417 ntBASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 RPS26P56-201ENST00000444468 240 ntBASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 USP9YP29-201ENST00000445112 563 ntBASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 RPL39P6-201ENST00000448289 150 ntBASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 EPS15P1-201ENST00000448836 336 ntBASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 SSXP1-201ENST00000453640 473 ntBASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 AC090142.1-201ENST00000465776 462 ntBASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 RPS27AP13-201ENST00000498403 237 ntBASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 AC110768.1-201ENST00000509222 400 ntBASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 CDC42P4-201ENST00000510507 563 ntBASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 MTND5P4-201ENST00000514978 288 ntBASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 OR6C7P-201ENST00000547875 934 ntBASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 CCNG2P1-201ENST00000549521 1000 ntBASIC5.43□□□□□ -1.54
SMC1BQ8NDV3 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms