Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AC090229.1-201ENST00000590983 1609 ntBASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 RNU2-8P-201ENST00000410727 190 ntBASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 RPS12P23-201ENST00000419579 400 ntBASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 RPL31P35-201ENST00000431058 377 ntBASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 AC119618.1-201ENST00000434191 222 ntBASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 AC090804.1-201ENST00000448870 490 ntBASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 RPL21P103-201ENST00000479921 488 ntBASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 OR4R3P-201ENST00000525084 838 ntBASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 SETP2-201ENST00000553886 926 ntBASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 MIR4660-201ENST00000583549 74 ntBASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 NRBF2P1-201ENST00000587407 859 ntBASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 AL512782.1-201ENST00000603093 364 ntBASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 AC011451.2-201ENST00000604303 598 ntBASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 AC115621.1-201ENST00000604653 858 ntBASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 AL365503.1-201ENST00000605247 905 ntBASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 AP000860.1-201ENST00000605250 559 ntBASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 AC010680.4-201ENST00000605334 543 ntBASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 MAPK10-328ENST00000641553 4009 ntBASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 MAPK10-338ENST00000641647 3362 ntBASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 AC011460.1-201ENST00000636268 1834 ntBASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 NMD3P1-201ENST00000439704 1488 ntBASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 MIR548F1-201ENST00000408667 84 ntBASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 RNA5SP56-201ENST00000410277 118 ntBASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 AC092447.6-201ENST00000414578 210 ntBASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 RAD23BP2-201ENST00000416003 1207 ntBASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 MTCYBP5-201ENST00000423752 1135 ntBASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 AC019097.1-201ENST00000424783 735 ntBASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 AL353777.1-201ENST00000425552 326 ntBASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 RPL7AP49-201ENST00000429522 581 ntBASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 AL591438.1-201ENST00000433508 581 ntBASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 ELOCP18-201ENST00000434209 337 ntBASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 AC009961.2-201ENST00000435771 251 ntBASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 AL451074.3-201ENST00000437709 472 ntBASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 GAPDHP14-201ENST00000450472 937 ntBASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 RGS5-217ENST00000451759 835 ntTSL 3 BASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 AC009963.2-201ENST00000453431 138 ntBASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 AC104308.1-201ENST00000454621 333 ntBASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 RN7SL443P-201ENST00000464331 290 ntBASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 AL672167.3-201ENST00000465951 960 ntBASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 IGBP1P4-201ENST00000503202 879 ntBASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 AC108145.1-201ENST00000503770 153 ntBASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 AC022483.1-201ENST00000514020 567 ntBASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 HMGB3P26-201ENST00000560051 582 ntBASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 AL356432.3-201ENST00000568952 465 ntBASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 MIR5096-201ENST00000583713 70 ntBASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 AL022154.1-201ENST00000604698 785 ntBASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 AF250324.2-201ENST00000608299 610 ntBASIC5.16□□□□□ -1.58
SYNPOQ8N3V7 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms