Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC093878.1-201ENST00000515630 432 ntBASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 RNU2-69P-201ENST00000516061 100 ntBASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 RNU1-54P-201ENST00000517181 120 ntBASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 AP001858.2-201ENST00000536213 601 ntBASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 AL161670.1-201ENST00000554348 137 ntBASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 AC018462.2-201ENST00000605375 395 ntBASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 PRR13P7-201ENST00000605538 430 ntBASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 MIR7854-201ENST00000620068 65 ntBASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 AP001264.1-201ENST00000620602 703 ntBASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 Y_RNA.47-201ENST00000362697 108 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 Y_RNA.176-201ENST00000363815 109 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 RN7SKP191-201ENST00000364713 306 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 Y_RNA.557-201ENST00000384680 107 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 RNA5SP155-201ENST00000411154 129 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 HMGB3P2-201ENST00000411913 584 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 CYCSP10-201ENST00000417973 294 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 NUP35P1-201ENST00000422734 947 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 PTPN2P1-201ENST00000423212 1072 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 HMGB3P24-201ENST00000433260 622 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 H2AFZP6-201ENST00000444403 394 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 RPL23AP28-201ENST00000448062 470 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 AC094085.1-201ENST00000468914 584 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 AC128713.1-201ENST00000471495 306 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 AP003385.3-201ENST00000472498 287 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 RPL7AP23-201ENST00000482625 776 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 AP001086.1-201ENST00000494882 321 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 MRPS35P2-201ENST00000508242 191 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 AC021146.3-201ENST00000511911 260 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 AC026782.1-201ENST00000512952 449 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 RN7SKP70-201ENST00000516655 271 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 IGKV2-19-201ENST00000518132 283 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 AP003396.4-201ENST00000527574 265 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 AP000676.2-201ENST00000529711 301 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 OR4H6P-201ENST00000563771 921 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 AC024267.2-201ENST00000582737 417 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 AC012175.1-201ENST00000603755 531 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 AL355598.1-201ENST00000604169 202 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 AL031320.1-201ENST00000604177 357 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 AL354984.3-201ENST00000604803 325 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 AL590032.1-201ENST00000604920 252 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 AC090425.1-201ENST00000610007 140 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 AC024255.1-201ENST00000614376 102 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 AL359547.2-201ENST00000615810 418 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 AL162373.1-201ENST00000620433 407 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 AC011755.1-201ENST00000623763 2049 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 MIR4275-201ENST00000636486 87 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 ZNF806-201ENST00000438300 1774 ntBASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.95□□□□□ -1.46
DEPDC4Q8N2C3 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms