Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.94□□□□□ -1.78
SHFQ7M4L6 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SHFQ7M4L6 PABPC1P9-201ENST00000426076 1612 ntBASIC3.94□□□□□ -1.78
SHFQ7M4L6 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SHFQ7M4L6 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.94□□□□□ -1.78
SHFQ7M4L6 AC092104.1-201ENST00000497346 1441 ntBASIC3.94□□□□□ -1.78
SHFQ7M4L6 RARSP1-201ENST00000542842 1418 ntBASIC3.94□□□□□ -1.78
SHFQ7M4L6 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.94□□□□□ -1.78
SHFQ7M4L6 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SHFQ7M4L6 SAGE4P-201ENST00000442271 3381 ntBASIC3.94□□□□□ -1.78
SHFQ7M4L6 AL122126.1-201ENST00000546905 1318 ntBASIC3.94□□□□□ -1.78
SHFQ7M4L6 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SHFQ7M4L6 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SHFQ7M4L6 AC131971.1-201ENST00000332881 1482 ntBASIC3.93□□□□□ -1.78
SHFQ7M4L6 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.93□□□□□ -1.78
SHFQ7M4L6 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SHFQ7M4L6 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.93□□□□□ -1.78
SHFQ7M4L6 AL121657.1-201ENST00000327215 531 ntBASIC3.93□□□□□ -1.78
SHFQ7M4L6 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.93□□□□□ -1.78
SHFQ7M4L6 AL109941.1-201ENST00000401925 229 ntBASIC3.93□□□□□ -1.78
SHFQ7M4L6 AL024474.1-201ENST00000404655 591 ntBASIC3.93□□□□□ -1.78
SHFQ7M4L6 RN7SKP142-201ENST00000411236 328 ntBASIC3.93□□□□□ -1.78
SHFQ7M4L6 BX510359.3-201ENST00000422168 306 ntBASIC3.93□□□□□ -1.78
SHFQ7M4L6 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SHFQ7M4L6 AL512649.1-201ENST00000428997 581 ntBASIC3.93□□□□□ -1.78
SHFQ7M4L6 DLGAP5P1-201ENST00000430307 464 ntBASIC3.93□□□□□ -1.78
SHFQ7M4L6 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.93□□□□□ -1.78
SHFQ7M4L6 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.93□□□□□ -1.78
SHFQ7M4L6 VN1R54P-201ENST00000435210 1049 ntBASIC3.93□□□□□ -1.78
SHFQ7M4L6 RPL7P28-201ENST00000437739 740 ntBASIC3.93□□□□□ -1.78
SHFQ7M4L6 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.93□□□□□ -1.78
SHFQ7M4L6 COX6CP2-201ENST00000444980 225 ntBASIC3.93□□□□□ -1.78
SHFQ7M4L6 ABCF2P2-201ENST00000450549 296 ntBASIC3.93□□□□□ -1.78
SHFQ7M4L6 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.93□□□□□ -1.78
SHFQ7M4L6 HIGD1AP8-201ENST00000453927 274 ntBASIC3.93□□□□□ -1.78
SHFQ7M4L6 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.93□□□□□ -1.78
SHFQ7M4L6 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.93□□□□□ -1.78
SHFQ7M4L6 RPS26P15-201ENST00000488067 348 ntBASIC3.93□□□□□ -1.78
SHFQ7M4L6 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.93□□□□□ -1.78
SHFQ7M4L6 RN7SL812P-201ENST00000493791 279 ntBASIC3.93□□□□□ -1.78
SHFQ7M4L6 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.93□□□□□ -1.78
SHFQ7M4L6 AC004069.2-201ENST00000505438 1114 ntBASIC3.93□□□□□ -1.78
SHFQ7M4L6 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
SHFQ7M4L6 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.93□□□□□ -1.78
SHFQ7M4L6 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.93□□□□□ -1.78
SHFQ7M4L6 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.93□□□□□ -1.78
SHFQ7M4L6 AP001922.4-201ENST00000526967 290 ntBASIC3.93□□□□□ -1.78
SHFQ7M4L6 PHBP17-201ENST00000528576 541 ntBASIC3.93□□□□□ -1.78
SHFQ7M4L6 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.93□□□□□ -1.78
SHFQ7M4L6 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.93□□□□□ -1.78
SHFQ7M4L6 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.93□□□□□ -1.78
SHFQ7M4L6 MIR3934-201ENST00000579806 107 ntBASIC3.93□□□□□ -1.78
SHFQ7M4L6 AP001004.1-201ENST00000582468 324 ntBASIC3.93□□□□□ -1.78
SHFQ7M4L6 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.93□□□□□ -1.78
SHFQ7M4L6 AC025588.4-201ENST00000615802 908 ntBASIC3.93□□□□□ -1.78
SHFQ7M4L6 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.93□□□□□ -1.78
SHFQ7M4L6 FAM157B-203ENST00000639350 358 ntBASIC3.93□□□□□ -1.78
SHFQ7M4L6 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.93□□□□□ -1.78
SHFQ7M4L6 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SHFQ7M4L6 AL592148.3-201ENST00000608771 2646 ntBASIC3.93□□□□□ -1.78
SHFQ7M4L6 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SHFQ7M4L6 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SHFQ7M4L6 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.93□□□□□ -1.78
SHFQ7M4L6 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SHFQ7M4L6 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SHFQ7M4L6 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SHFQ7M4L6 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
SHFQ7M4L6 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
SHFQ7M4L6 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
SHFQ7M4L6 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SHFQ7M4L6 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
SHFQ7M4L6 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SHFQ7M4L6 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SHFQ7M4L6 MTCO1P23-201ENST00000415223 1526 ntBASIC3.92□□□□□ -1.78
SHFQ7M4L6 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.92□□□□□ -1.78
SHFQ7M4L6 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.92□□□□□ -1.78
SHFQ7M4L6 RNU6-777P-201ENST00000364265 104 ntBASIC3.92□□□□□ -1.78
SHFQ7M4L6 Y_RNA.553-201ENST00000384670 102 ntBASIC3.92□□□□□ -1.78
SHFQ7M4L6 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SHFQ7M4L6 RNA5SP397-201ENST00000391323 118 ntBASIC3.92□□□□□ -1.78
SHFQ7M4L6 ENSAP1-201ENST00000392855 326 ntBASIC3.92□□□□□ -1.78
SHFQ7M4L6 AL138880.1-201ENST00000405824 642 ntBASIC3.92□□□□□ -1.78
SHFQ7M4L6 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
SHFQ7M4L6 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.92□□□□□ -1.78
SHFQ7M4L6 AC006366.1-201ENST00000422002 759 ntBASIC3.92□□□□□ -1.78
SHFQ7M4L6 NPM1P34-201ENST00000428821 893 ntBASIC3.92□□□□□ -1.78
SHFQ7M4L6 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.92□□□□□ -1.78
SHFQ7M4L6 AL365184.2-201ENST00000431139 435 ntBASIC3.92□□□□□ -1.78
SHFQ7M4L6 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.92□□□□□ -1.78
SHFQ7M4L6 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.92□□□□□ -1.78
SHFQ7M4L6 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.92□□□□□ -1.78
SHFQ7M4L6 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.92□□□□□ -1.78
SHFQ7M4L6 MTCO1P19-201ENST00000443487 500 ntBASIC3.92□□□□□ -1.78
SHFQ7M4L6 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.92□□□□□ -1.78
SHFQ7M4L6 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.92□□□□□ -1.78
SHFQ7M4L6 AL162388.1-201ENST00000450912 352 ntBASIC3.92□□□□□ -1.78
SHFQ7M4L6 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.92□□□□□ -1.78
SHFQ7M4L6 AC116337.2-201ENST00000477662 156 ntBASIC3.92□□□□□ -1.78
SHFQ7M4L6 HMGB1P21-201ENST00000502313 581 ntBASIC3.92□□□□□ -1.78
SHFQ7M4L6 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms