Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 MUC2-202ENST00000613187 4845 ntBASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 AC012078.1-201ENST00000405035 1646 ntBASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 RNA5SP107-201ENST00000411358 122 ntBASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 RPL31P12-201ENST00000422587 358 ntBASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 HMGN1P5-201ENST00000448591 263 ntBASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 UQCRHP3-201ENST00000451503 251 ntBASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 KLHL2P1-201ENST00000508691 521 ntBASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 AC110741.2-201ENST00000605278 268 ntBASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 U3.11-201ENST00000364476 212 ntBASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 AC002553.2-201ENST00000453217 340 ntBASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 AC004801.2-202ENST00000463559 283 ntBASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 AC008837.1-201ENST00000511513 412 ntBASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 RN7SKP244-201ENST00000516513 307 ntBASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 IGLVIV-53-201ENST00000520107 367 ntBASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 PDCD5P1-201ENST00000543528 309 ntBASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 CR381653.2-201ENST00000624041 768 ntBASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 FER-202ENST00000438717 1531 ntTSL 2 BASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 AL161781.1-201ENST00000354277 403 ntBASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 YPEL5P1-201ENST00000419731 367 ntBASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 RPL21P41-201ENST00000459863 264 ntBASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 HMGB1P25-201ENST00000468402 607 ntBASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 AADACP1-206ENST00000561502 1193 ntBASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 AC009063.1-201ENST00000563342 702 ntBASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC1.81□□□□□ -2.12
VPS13DQ5THJ4 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 SCGB1D5P-201ENST00000515134 247 ntBASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 AC091515.1-201ENST00000548110 679 ntBASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 AC006960.1-201ENST00000419980 153 ntBASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 AC134882.1-201ENST00000603738 1676 ntBASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 AL591416.1-201ENST00000404015 867 ntBASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 VTA1P1-201ENST00000414044 866 ntBASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 RPS20P5-201ENST00000434808 360 ntBASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 RPL29P29-201ENST00000448725 423 ntBASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 CKS1BP2-201ENST00000497342 240 ntBASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 RNA5SP320-201ENST00000516263 124 ntBASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 IGKV2D-23-201ENST00000518179 286 ntBASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 AC112220.1-201ENST00000434628 355 ntBASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 UBL5P3-201ENST00000475112 231 ntBASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 AC016687.1-201ENST00000482574 353 ntBASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 AC009977.1-201ENST00000586015 570 ntBASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 AC025946.2-201ENST00000603398 234 ntBASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
VPS13DQ5THJ4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 RAC1P3-201ENST00000416129 580 ntBASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 AC092608.2-201ENST00000624427 218 ntBASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 AC026634.1-201ENST00000634369 198 ntBASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms