Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RN7SKP147-201ENST00000517154 244 ntBASIC6.95□□□□□ -1.3
RC3H1Q5TC82 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC6.95□□□□□ -1.3
RC3H1Q5TC82 AC107934.1-201ENST00000522215 217 ntBASIC6.95□□□□□ -1.3
RC3H1Q5TC82 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
RC3H1Q5TC82 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.95□□□□□ -1.3
RC3H1Q5TC82 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC6.95□□□□□ -1.3
RC3H1Q5TC82 MIR3934-201ENST00000579806 107 ntBASIC6.95□□□□□ -1.3
RC3H1Q5TC82 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC6.95□□□□□ -1.3
RC3H1Q5TC82 BNIP3P16-201ENST00000589779 534 ntBASIC6.95□□□□□ -1.3
RC3H1Q5TC82 AL713866.2-201ENST00000603579 219 ntBASIC6.95□□□□□ -1.3
RC3H1Q5TC82 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
RC3H1Q5TC82 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RC3H1Q5TC82 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.95□□□□□ -1.3
RC3H1Q5TC82 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RC3H1Q5TC82 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.95□□□□□ -1.3
RC3H1Q5TC82 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RC3H1Q5TC82 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC6.95□□□□□ -1.3
RC3H1Q5TC82 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
RC3H1Q5TC82 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
RC3H1Q5TC82 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RC3H1Q5TC82 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC6.95□□□□□ -1.3
RC3H1Q5TC82 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
RC3H1Q5TC82 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.95□□□□□ -1.3
RC3H1Q5TC82 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.94□□□□□ -1.3
RC3H1Q5TC82 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
RC3H1Q5TC82 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
RC3H1Q5TC82 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6.94□□□□□ -1.3
RC3H1Q5TC82 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.94□□□□□ -1.3
RC3H1Q5TC82 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RC3H1Q5TC82 AC097504.1-201ENST00000515103 2415 ntBASIC6.94□□□□□ -1.3
RC3H1Q5TC82 RNU6-657P-201ENST00000383904 107 ntBASIC6.94□□□□□ -1.3
RC3H1Q5TC82 SNORA51.8-201ENST00000384234 132 ntBASIC6.94□□□□□ -1.3
RC3H1Q5TC82 AL109755.1-201ENST00000401791 649 ntBASIC6.94□□□□□ -1.3
RC3H1Q5TC82 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.94□□□□□ -1.3
RC3H1Q5TC82 RPL12P17-201ENST00000432393 498 ntBASIC6.94□□□□□ -1.3
RC3H1Q5TC82 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RC3H1Q5TC82 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC6.94□□□□□ -1.3
RC3H1Q5TC82 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RC3H1Q5TC82 RPS7P5-201ENST00000441482 581 ntBASIC6.94□□□□□ -1.3
RC3H1Q5TC82 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.94□□□□□ -1.3
RC3H1Q5TC82 HSPD1P15-201ENST00000505573 1122 ntBASIC6.94□□□□□ -1.3
RC3H1Q5TC82 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC6.94□□□□□ -1.3
RC3H1Q5TC82 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.94□□□□□ -1.3
RC3H1Q5TC82 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC6.94□□□□□ -1.3
RC3H1Q5TC82 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC6.94□□□□□ -1.3
RC3H1Q5TC82 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.94□□□□□ -1.3
RC3H1Q5TC82 AC024940.3-201ENST00000538551 316 ntBASIC6.94□□□□□ -1.3
RC3H1Q5TC82 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.94□□□□□ -1.3
RC3H1Q5TC82 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC6.94□□□□□ -1.3
RC3H1Q5TC82 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC6.94□□□□□ -1.3
RC3H1Q5TC82 RRN3P3-201ENST00000549207 578 ntBASIC6.94□□□□□ -1.3
RC3H1Q5TC82 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.94□□□□□ -1.3
RC3H1Q5TC82 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.94□□□□□ -1.3
RC3H1Q5TC82 AL513327.3-201ENST00000602618 469 ntBASIC6.94□□□□□ -1.3
RC3H1Q5TC82 AC104695.3-201ENST00000604052 296 ntBASIC6.94□□□□□ -1.3
RC3H1Q5TC82 AC012409.4-201ENST00000612923 249 ntBASIC6.94□□□□□ -1.3
RC3H1Q5TC82 AL353662.3-201ENST00000625131 237 ntBASIC6.94□□□□□ -1.3
RC3H1Q5TC82 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
RC3H1Q5TC82 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
RC3H1Q5TC82 AC093909.5-201ENST00000621839 1799 ntBASIC6.94□□□□□ -1.3
RC3H1Q5TC82 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.94□□□□□ -1.3
RC3H1Q5TC82 AL442128.2-201ENST00000620246 1824 ntBASIC6.94□□□□□ -1.3
RC3H1Q5TC82 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
RC3H1Q5TC82 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
RC3H1Q5TC82 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
RC3H1Q5TC82 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RC3H1Q5TC82 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RC3H1Q5TC82 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RC3H1Q5TC82 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
RC3H1Q5TC82 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RC3H1Q5TC82 PANDAR-201ENST00000629595 1506 ntBASIC6.93□□□□□ -1.3
RC3H1Q5TC82 AL033543.1-201ENST00000623440 13454 ntBASIC6.93□□□□□ -1.3
RC3H1Q5TC82 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
RC3H1Q5TC82 Y_RNA.646-201ENST00000410980 101 ntBASIC6.93□□□□□ -1.3
RC3H1Q5TC82 CBX1P3-201ENST00000413296 527 ntBASIC6.93□□□□□ -1.3
RC3H1Q5TC82 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC6.93□□□□□ -1.3
RC3H1Q5TC82 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.93□□□□□ -1.3
RC3H1Q5TC82 HMGB1P15-201ENST00000453854 435 ntBASIC6.93□□□□□ -1.3
RC3H1Q5TC82 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.93□□□□□ -1.3
RC3H1Q5TC82 AC092451.1-201ENST00000480211 153 ntBASIC6.93□□□□□ -1.3
RC3H1Q5TC82 ATP5LP5-201ENST00000483050 299 ntBASIC6.93□□□□□ -1.3
RC3H1Q5TC82 AC083982.1-201ENST00000485679 344 ntBASIC6.93□□□□□ -1.3
RC3H1Q5TC82 Y_RNA.721-201ENST00000517207 102 ntBASIC6.93□□□□□ -1.3
RC3H1Q5TC82 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.93□□□□□ -1.3
RC3H1Q5TC82 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC6.93□□□□□ -1.3
RC3H1Q5TC82 AC090525.3-201ENST00000605601 189 ntBASIC6.93□□□□□ -1.3
RC3H1Q5TC82 AL133481.2-203ENST00000607558 139 ntBASIC6.93□□□□□ -1.3
RC3H1Q5TC82 AC098657.3-201ENST00000620434 263 ntBASIC6.93□□□□□ -1.3
RC3H1Q5TC82 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC6.93□□□□□ -1.3
RC3H1Q5TC82 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
RC3H1Q5TC82 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RC3H1Q5TC82 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RC3H1Q5TC82 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RC3H1Q5TC82 TTC41P-205ENST00000551270 3963 ntBASIC6.93□□□□□ -1.3
RC3H1Q5TC82 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.92□□□□□ -1.3
RC3H1Q5TC82 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
RC3H1Q5TC82 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
RC3H1Q5TC82 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RC3H1Q5TC82 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RC3H1Q5TC82 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms