Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.41□□□□□ -2.02
LRRK2Q5S007 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC2.41□□□□□ -2.02
LRRK2Q5S007 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LRRK2Q5S007 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC2.4□□□□□ -2.02
LRRK2Q5S007 MRPS31P2-201ENST00000451581 518 ntBASIC2.4□□□□□ -2.02
LRRK2Q5S007 HMGN2P23-201ENST00000456759 269 ntBASIC2.4□□□□□ -2.02
LRRK2Q5S007 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.4□□□□□ -2.02
LRRK2Q5S007 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.4□□□□□ -2.02
LRRK2Q5S007 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.02
LRRK2Q5S007 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
LRRK2Q5S007 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC2.4□□□□□ -2.03
LRRK2Q5S007 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC2.4□□□□□ -2.03
LRRK2Q5S007 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
LRRK2Q5S007 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
LRRK2Q5S007 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC2.4□□□□□ -2.03
LRRK2Q5S007 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC2.4□□□□□ -2.03
LRRK2Q5S007 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
LRRK2Q5S007 DPH3P2-201ENST00000422618 250 ntBASIC2.4□□□□□ -2.03
LRRK2Q5S007 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC2.4□□□□□ -2.03
LRRK2Q5S007 AC096725.1-201ENST00000514266 313 ntBASIC2.4□□□□□ -2.03
LRRK2Q5S007 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC2.4□□□□□ -2.03
LRRK2Q5S007 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC2.4□□□□□ -2.03
LRRK2Q5S007 AC020895.1-201ENST00000595362 272 ntBASIC2.4□□□□□ -2.03
LRRK2Q5S007 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.4□□□□□ -2.03
LRRK2Q5S007 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.03
LRRK2Q5S007 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
LRRK2Q5S007 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC2.4□□□□□ -2.03
LRRK2Q5S007 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.03
LRRK2Q5S007 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
LRRK2Q5S007 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC2.39□□□□□ -2.03
LRRK2Q5S007 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC2.39□□□□□ -2.03
LRRK2Q5S007 MIR27B-201ENST00000385129 97 ntBASIC2.39□□□□□ -2.03
LRRK2Q5S007 AC104297.1-201ENST00000393779 870 ntBASIC2.39□□□□□ -2.03
LRRK2Q5S007 MTND2P11-201ENST00000423638 648 ntBASIC2.39□□□□□ -2.03
LRRK2Q5S007 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.39□□□□□ -2.03
LRRK2Q5S007 AC010307.1-201ENST00000467206 836 ntBASIC2.39□□□□□ -2.03
LRRK2Q5S007 AC078817.1-201ENST00000492623 435 ntBASIC2.39□□□□□ -2.03
LRRK2Q5S007 RNA5SP480-201ENST00000516840 109 ntBASIC2.39□□□□□ -2.03
LRRK2Q5S007 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.39□□□□□ -2.03
LRRK2Q5S007 AP005262.1-201ENST00000582646 997 ntBASIC2.39□□□□□ -2.03
LRRK2Q5S007 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.39□□□□□ -2.03
LRRK2Q5S007 Y_RNA.374-201ENST00000365606 101 ntBASIC2.39□□□□□ -2.03
LRRK2Q5S007 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
LRRK2Q5S007 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
LRRK2Q5S007 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC2.39□□□□□ -2.03
LRRK2Q5S007 AL162389.1-201ENST00000449233 177 ntBASIC2.39□□□□□ -2.03
LRRK2Q5S007 Y_RNA.670-201ENST00000516255 105 ntBASIC2.39□□□□□ -2.03
LRRK2Q5S007 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.39□□□□□ -2.03
LRRK2Q5S007 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC2.39□□□□□ -2.03
LRRK2Q5S007 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.39□□□□□ -2.03
LRRK2Q5S007 AL596275.2-204ENST00000641628 552 ntBASIC2.39□□□□□ -2.03
LRRK2Q5S007 AL596275.2-206ENST00000641957 626 ntBASIC2.39□□□□□ -2.03
LRRK2Q5S007 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC2.39□□□□□ -2.03
LRRK2Q5S007 NSRP1P1-201ENST00000444067 1693 ntBASIC2.39□□□□□ -2.03
LRRK2Q5S007 AL161431.1-201ENST00000618966 4205 ntBASIC2.39□□□□□ -2.03
LRRK2Q5S007 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.38□□□□□ -2.03
LRRK2Q5S007 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
LRRK2Q5S007 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC2.38□□□□□ -2.03
LRRK2Q5S007 MIR518C-201ENST00000384822 101 ntBASIC2.38□□□□□ -2.03
LRRK2Q5S007 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.38□□□□□ -2.03
LRRK2Q5S007 HMGB1P16-201ENST00000447155 540 ntBASIC2.38□□□□□ -2.03
LRRK2Q5S007 RPL7P52-201ENST00000449200 742 ntBASIC2.38□□□□□ -2.03
LRRK2Q5S007 RN7SL93P-201ENST00000463035 293 ntBASIC2.38□□□□□ -2.03
LRRK2Q5S007 RPL9P6-201ENST00000492764 598 ntBASIC2.38□□□□□ -2.03
LRRK2Q5S007 RN7SKP219-201ENST00000516825 296 ntBASIC2.38□□□□□ -2.03
LRRK2Q5S007 AP001636.2-201ENST00000525517 696 ntBASIC2.38□□□□□ -2.03
LRRK2Q5S007 CYP2C60P-201ENST00000566088 139 ntBASIC2.38□□□□□ -2.03
LRRK2Q5S007 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
LRRK2Q5S007 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC2.38□□□□□ -2.03
LRRK2Q5S007 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
LRRK2Q5S007 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC2.38□□□□□ -2.03
LRRK2Q5S007 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.38□□□□□ -2.03
LRRK2Q5S007 AC104454.1-201ENST00000421341 1401 ntBASIC2.38□□□□□ -2.03
LRRK2Q5S007 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC2.38□□□□□ -2.03
LRRK2Q5S007 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.38□□□□□ -2.03
LRRK2Q5S007 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.38□□□□□ -2.03
LRRK2Q5S007 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.38□□□□□ -2.03
LRRK2Q5S007 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
LRRK2Q5S007 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.38□□□□□ -2.03
LRRK2Q5S007 AP002088.1-201ENST00000382740 395 ntBASIC2.38□□□□□ -2.03
LRRK2Q5S007 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
LRRK2Q5S007 AC092013.1-201ENST00000438795 332 ntBASIC2.38□□□□□ -2.03
LRRK2Q5S007 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.38□□□□□ -2.03
LRRK2Q5S007 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2.38□□□□□ -2.03
LRRK2Q5S007 Z99127.3-201ENST00000448158 395 ntBASIC2.38□□□□□ -2.03
LRRK2Q5S007 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.38□□□□□ -2.03
LRRK2Q5S007 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.38□□□□□ -2.03
LRRK2Q5S007 SYT14P1-201ENST00000481459 721 ntBASIC2.38□□□□□ -2.03
LRRK2Q5S007 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.38□□□□□ -2.03
LRRK2Q5S007 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.38□□□□□ -2.03
LRRK2Q5S007 AC007954.1-201ENST00000554198 494 ntBASIC2.38□□□□□ -2.03
LRRK2Q5S007 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.38□□□□□ -2.03
LRRK2Q5S007 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.38□□□□□ -2.03
LRRK2Q5S007 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.38□□□□□ -2.03
LRRK2Q5S007 RN7SL622P-201ENST00000585292 275 ntBASIC2.38□□□□□ -2.03
LRRK2Q5S007 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC2.38□□□□□ -2.03
LRRK2Q5S007 AP004247.3-201ENST00000608682 624 ntBASIC2.38□□□□□ -2.03
LRRK2Q5S007 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
LRRK2Q5S007 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
LRRK2Q5S007 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms