Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AL138880.1-201ENST00000405824 642 ntBASIC5.06□□□□□ -1.6
LONRF3Q496Y0 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.06□□□□□ -1.6
LONRF3Q496Y0 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC5.06□□□□□ -1.6
LONRF3Q496Y0 EI24P1-201ENST00000416584 867 ntBASIC5.06□□□□□ -1.6
LONRF3Q496Y0 RPL7AP25-201ENST00000423357 805 ntBASIC5.06□□□□□ -1.6
LONRF3Q496Y0 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.06□□□□□ -1.6
LONRF3Q496Y0 AL138799.3-201ENST00000438968 350 ntBASIC5.06□□□□□ -1.6
LONRF3Q496Y0 RPL23AP93-201ENST00000440847 484 ntBASIC5.06□□□□□ -1.6
LONRF3Q496Y0 AL360221.1-201ENST00000445989 335 ntBASIC5.06□□□□□ -1.6
LONRF3Q496Y0 RPL23AP43-201ENST00000446445 471 ntBASIC5.06□□□□□ -1.6
LONRF3Q496Y0 VN1R10P-201ENST00000447106 875 ntBASIC5.06□□□□□ -1.6
LONRF3Q496Y0 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.06□□□□□ -1.6
LONRF3Q496Y0 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.06□□□□□ -1.6
LONRF3Q496Y0 AC012671.1-201ENST00000451912 203 ntBASIC5.06□□□□□ -1.6
LONRF3Q496Y0 AC022034.3-201ENST00000471393 478 ntBASIC5.06□□□□□ -1.6
LONRF3Q496Y0 NCOR1P1-202ENST00000486162 291 ntBASIC5.06□□□□□ -1.6
LONRF3Q496Y0 AC093767.1-201ENST00000504523 156 ntBASIC5.06□□□□□ -1.6
LONRF3Q496Y0 AC005921.1-201ENST00000510589 286 ntBASIC5.06□□□□□ -1.6
LONRF3Q496Y0 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.06□□□□□ -1.6
LONRF3Q496Y0 RN7SKP116-201ENST00000516902 319 ntBASIC5.06□□□□□ -1.6
LONRF3Q496Y0 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.06□□□□□ -1.6
LONRF3Q496Y0 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.06□□□□□ -1.6
LONRF3Q496Y0 AP003033.1-201ENST00000527244 415 ntBASIC5.06□□□□□ -1.6
LONRF3Q496Y0 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LONRF3Q496Y0 OR4A12P-201ENST00000530847 918 ntBASIC5.06□□□□□ -1.6
LONRF3Q496Y0 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.06□□□□□ -1.6
LONRF3Q496Y0 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.06□□□□□ -1.6
LONRF3Q496Y0 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC5.06□□□□□ -1.6
LONRF3Q496Y0 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LONRF3Q496Y0 AC084783.1-201ENST00000565846 910 ntBASIC5.06□□□□□ -1.6
LONRF3Q496Y0 KPNA2P3-201ENST00000584190 848 ntBASIC5.06□□□□□ -1.6
LONRF3Q496Y0 AC008759.1-201ENST00000589783 983 ntBASIC5.06□□□□□ -1.6
LONRF3Q496Y0 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC5.06□□□□□ -1.6
LONRF3Q496Y0 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LONRF3Q496Y0 IGHV3-29-201ENST00000604817 344 ntBASIC5.06□□□□□ -1.6
LONRF3Q496Y0 AL160290.3-201ENST00000604869 165 ntBASIC5.06□□□□□ -1.6
LONRF3Q496Y0 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
LONRF3Q496Y0 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LONRF3Q496Y0 MIR6830-201ENST00000636015 70 ntBASIC5.06□□□□□ -1.6
LONRF3Q496Y0 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
LONRF3Q496Y0 AL359893.1-201ENST00000447628 1580 ntBASIC5.06□□□□□ -1.6
LONRF3Q496Y0 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.06□□□□□ -1.6
LONRF3Q496Y0 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
LONRF3Q496Y0 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LONRF3Q496Y0 AC125257.1-201ENST00000560400 2930 ntBASIC5.06□□□□□ -1.6
LONRF3Q496Y0 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LONRF3Q496Y0 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
LONRF3Q496Y0 DDX43P2-201ENST00000604753 1354 ntBASIC5.05□□□□□ -1.6
LONRF3Q496Y0 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
LONRF3Q496Y0 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LONRF3Q496Y0 RNU6-263P-201ENST00000363811 107 ntBASIC5.05□□□□□ -1.6
LONRF3Q496Y0 SNORA71.2-201ENST00000364941 134 ntBASIC5.05□□□□□ -1.6
LONRF3Q496Y0 SNORD82-201ENST00000365530 70 ntBASIC5.05□□□□□ -1.6
LONRF3Q496Y0 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
LONRF3Q496Y0 RNU1-44P-201ENST00000384453 163 ntBASIC5.05□□□□□ -1.6
LONRF3Q496Y0 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LONRF3Q496Y0 RNU4-25P-201ENST00000410569 230 ntBASIC5.05□□□□□ -1.6
LONRF3Q496Y0 RNU4-78P-201ENST00000410940 126 ntBASIC5.05□□□□□ -1.6
LONRF3Q496Y0 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC5.05□□□□□ -1.6
LONRF3Q496Y0 AC062016.2-201ENST00000420950 676 ntBASIC5.05□□□□□ -1.6
LONRF3Q496Y0 AL592293.2-201ENST00000422292 996 ntBASIC5.05□□□□□ -1.6
LONRF3Q496Y0 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LONRF3Q496Y0 RPEP2-201ENST00000432149 701 ntBASIC5.05□□□□□ -1.6
LONRF3Q496Y0 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.05□□□□□ -1.6
LONRF3Q496Y0 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.05□□□□□ -1.6
LONRF3Q496Y0 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LONRF3Q496Y0 MTCO2P18-201ENST00000457151 658 ntBASIC5.05□□□□□ -1.6
LONRF3Q496Y0 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.05□□□□□ -1.6
LONRF3Q496Y0 LAMTOR3P2-201ENST00000504479 232 ntBASIC5.05□□□□□ -1.6
LONRF3Q496Y0 AC112198.1-201ENST00000505369 1220 ntBASIC5.05□□□□□ -1.6
LONRF3Q496Y0 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.05□□□□□ -1.6
LONRF3Q496Y0 RNU6-678P-201ENST00000516832 109 ntBASIC5.05□□□□□ -1.6
LONRF3Q496Y0 AC007115.1-201ENST00000546853 234 ntBASIC5.05□□□□□ -1.6
LONRF3Q496Y0 AL121766.1-201ENST00000547436 487 ntBASIC5.05□□□□□ -1.6
LONRF3Q496Y0 PARP1P2-201ENST00000556806 195 ntBASIC5.05□□□□□ -1.6
LONRF3Q496Y0 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.05□□□□□ -1.6
LONRF3Q496Y0 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.05□□□□□ -1.6
LONRF3Q496Y0 AC107954.1-201ENST00000565906 727 ntBASIC5.05□□□□□ -1.6
LONRF3Q496Y0 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.05□□□□□ -1.6
LONRF3Q496Y0 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.05□□□□□ -1.6
LONRF3Q496Y0 AC018714.1-201ENST00000605028 208 ntBASIC5.05□□□□□ -1.6
LONRF3Q496Y0 AP001521.1-201ENST00000609150 300 ntBASIC5.05□□□□□ -1.6
LONRF3Q496Y0 AC008083.4-201ENST00000615076 444 ntBASIC5.05□□□□□ -1.6
LONRF3Q496Y0 AL136981.2-201ENST00000617319 734 ntBASIC5.05□□□□□ -1.6
LONRF3Q496Y0 AC011944.2-201ENST00000624440 683 ntBASIC5.05□□□□□ -1.6
LONRF3Q496Y0 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LONRF3Q496Y0 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
LONRF3Q496Y0 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
LONRF3Q496Y0 CDR1-202ENST00000625883 1485 ntBASIC5.05□□□□□ -1.6
LONRF3Q496Y0 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.05□□□□□ -1.6
LONRF3Q496Y0 AL157700.1-201ENST00000561973 1432 ntBASIC5.05□□□□□ -1.6
LONRF3Q496Y0 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.05□□□□□ -1.6
LONRF3Q496Y0 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.05□□□□□ -1.6
LONRF3Q496Y0 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
LONRF3Q496Y0 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
LONRF3Q496Y0 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
LONRF3Q496Y0 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.04□□□□□ -1.6
LONRF3Q496Y0 MARK2P15-201ENST00000432204 2186 ntBASIC5.04□□□□□ -1.6
LONRF3Q496Y0 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
LONRF3Q496Y0 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms