Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTCH1Q13635 SNORA62.2-201ENST00000364672 152 ntBASIC4.31□□□□□ -1.72
PTCH1Q13635 MTND4P11-201ENST00000417020 1058 ntBASIC4.31□□□□□ -1.72
PTCH1Q13635 AC127526.1-201ENST00000417526 366 ntBASIC4.31□□□□□ -1.72
PTCH1Q13635 RPS12P5-201ENST00000423449 371 ntBASIC4.31□□□□□ -1.72
PTCH1Q13635 PPIAP17-201ENST00000438507 471 ntBASIC4.31□□□□□ -1.72
PTCH1Q13635 RPL7P31-201ENST00000450192 724 ntBASIC4.31□□□□□ -1.72
PTCH1Q13635 AL162388.1-201ENST00000450912 352 ntBASIC4.31□□□□□ -1.72
PTCH1Q13635 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.31□□□□□ -1.72
PTCH1Q13635 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PTCH1Q13635 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
PTCH1Q13635 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.31□□□□□ -1.72
PTCH1Q13635 AP001636.2-201ENST00000525517 696 ntBASIC4.31□□□□□ -1.72
PTCH1Q13635 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.31□□□□□ -1.72
PTCH1Q13635 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.31□□□□□ -1.72
PTCH1Q13635 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.31□□□□□ -1.72
PTCH1Q13635 AC245128.3-201ENST00000594721 748 ntBASIC4.31□□□□□ -1.72
PTCH1Q13635 MIR7973-1-201ENST00000614683 76 ntBASIC4.31□□□□□ -1.72
PTCH1Q13635 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.31□□□□□ -1.72
PTCH1Q13635 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTCH1Q13635 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.31□□□□□ -1.72
PTCH1Q13635 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.31□□□□□ -1.72
PTCH1Q13635 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTCH1Q13635 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTCH1Q13635 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
PTCH1Q13635 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTCH1Q13635 OR1S2-201ENST00000302592 978 ntBASIC4.3□□□□□ -1.72
PTCH1Q13635 RNU6-984P-201ENST00000363236 109 ntBASIC4.3□□□□□ -1.72
PTCH1Q13635 SNORA27.3-201ENST00000364937 134 ntBASIC4.3□□□□□ -1.72
PTCH1Q13635 AL645937.1-202ENST00000421799 937 ntBASIC4.3□□□□□ -1.72
PTCH1Q13635 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC4.3□□□□□ -1.72
PTCH1Q13635 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.3□□□□□ -1.72
PTCH1Q13635 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.3□□□□□ -1.72
PTCH1Q13635 MTCO1P52-201ENST00000433928 531 ntBASIC4.3□□□□□ -1.72
PTCH1Q13635 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.3□□□□□ -1.72
PTCH1Q13635 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.3□□□□□ -1.72
PTCH1Q13635 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.3□□□□□ -1.72
PTCH1Q13635 HIGD1AP13-201ENST00000509878 289 ntBASIC4.3□□□□□ -1.72
PTCH1Q13635 VWA8P1-201ENST00000510889 176 ntBASIC4.3□□□□□ -1.72
PTCH1Q13635 RNU1-41P-201ENST00000516161 162 ntBASIC4.3□□□□□ -1.72
PTCH1Q13635 RNU1-48P-201ENST00000516400 162 ntBASIC4.3□□□□□ -1.72
PTCH1Q13635 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.3□□□□□ -1.72
PTCH1Q13635 AC022790.1-201ENST00000522872 204 ntBASIC4.3□□□□□ -1.72
PTCH1Q13635 AC011602.1-201ENST00000546484 331 ntBASIC4.3□□□□□ -1.72
PTCH1Q13635 TGIF1P1-201ENST00000558095 802 ntBASIC4.3□□□□□ -1.72
PTCH1Q13635 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.3□□□□□ -1.72
PTCH1Q13635 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.3□□□□□ -1.72
PTCH1Q13635 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.3□□□□□ -1.72
PTCH1Q13635 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PTCH1Q13635 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTCH1Q13635 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
PTCH1Q13635 RNU6-452P-201ENST00000384406 107 ntBASIC4.29□□□□□ -1.72
PTCH1Q13635 HSPD1P16-201ENST00000402302 394 ntBASIC4.29□□□□□ -1.72
PTCH1Q13635 IPMKP1-201ENST00000425988 855 ntBASIC4.29□□□□□ -1.72
PTCH1Q13635 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
PTCH1Q13635 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.29□□□□□ -1.72
PTCH1Q13635 CST9LP2-201ENST00000437612 320 ntBASIC4.29□□□□□ -1.72
PTCH1Q13635 RPS24P13-201ENST00000442520 397 ntBASIC4.29□□□□□ -1.72
PTCH1Q13635 AC112492.1-201ENST00000449607 712 ntBASIC4.29□□□□□ -1.72
PTCH1Q13635 AL513124.1-201ENST00000450410 614 ntBASIC4.29□□□□□ -1.72
PTCH1Q13635 RNU6-775P-201ENST00000459318 96 ntBASIC4.29□□□□□ -1.72
PTCH1Q13635 AC023050.1-201ENST00000498198 304 ntBASIC4.29□□□□□ -1.72
PTCH1Q13635 AC083906.5-201ENST00000503722 328 ntBASIC4.29□□□□□ -1.72
PTCH1Q13635 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.29□□□□□ -1.72
PTCH1Q13635 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTCH1Q13635 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.29□□□□□ -1.72
PTCH1Q13635 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.29□□□□□ -1.72
PTCH1Q13635 AL365503.1-201ENST00000605247 905 ntBASIC4.29□□□□□ -1.72
PTCH1Q13635 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.29□□□□□ -1.72
PTCH1Q13635 AC110792.4-201ENST00000609843 298 ntBASIC4.29□□□□□ -1.72
PTCH1Q13635 AC231759.1-201ENST00000616455 597 ntBASIC4.29□□□□□ -1.72
PTCH1Q13635 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.29□□□□□ -1.72
PTCH1Q13635 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTCH1Q13635 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.29□□□□□ -1.72
PTCH1Q13635 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.29□□□□□ -1.72
PTCH1Q13635 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTCH1Q13635 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.29□□□□□ -1.72
PTCH1Q13635 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PTCH1Q13635 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PTCH1Q13635 HSPA8P1-201ENST00000425843 1833 ntBASIC4.29□□□□□ -1.72
PTCH1Q13635 MIR22-201ENST00000362190 85 ntBASIC4.29□□□□□ -1.72
PTCH1Q13635 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PTCH1Q13635 SNORD15B-201ENST00000384714 146 ntBASIC4.29□□□□□ -1.72
PTCH1Q13635 MIR184-201ENST00000384962 84 ntBASIC4.29□□□□□ -1.72
PTCH1Q13635 AL138878.1-201ENST00000405131 347 ntBASIC4.29□□□□□ -1.72
PTCH1Q13635 RPL7P8-201ENST00000411964 730 ntBASIC4.29□□□□□ -1.72
PTCH1Q13635 AC108938.1-201ENST00000451204 136 ntBASIC4.29□□□□□ -1.72
PTCH1Q13635 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.29□□□□□ -1.72
PTCH1Q13635 HMGB1P46-201ENST00000520062 610 ntBASIC4.29□□□□□ -1.72
PTCH1Q13635 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.29□□□□□ -1.72
PTCH1Q13635 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.29□□□□□ -1.72
PTCH1Q13635 NF1P5-201ENST00000588287 448 ntBASIC4.29□□□□□ -1.72
PTCH1Q13635 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.29□□□□□ -1.72
PTCH1Q13635 AL034351.1-201ENST00000605288 668 ntBASIC4.29□□□□□ -1.72
PTCH1Q13635 AC009032.1-201ENST00000617574 431 ntBASIC4.29□□□□□ -1.72
PTCH1Q13635 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.29□□□□□ -1.72
PTCH1Q13635 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.29□□□□□ -1.72
PTCH1Q13635 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC4.29□□□□□ -1.72
PTCH1Q13635 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTCH1Q13635 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms