Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 AC006065.5-201ENST00000623427 349 ntBASIC4.48□□□□□ -1.69
UBE3AQ05086 AC067931.1-201ENST00000624190 671 ntBASIC4.48□□□□□ -1.69
UBE3AQ05086 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.48□□□□□ -1.69
UBE3AQ05086 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.48□□□□□ -1.69
UBE3AQ05086 U6.101-201ENST00000637707 76 ntBASIC4.48□□□□□ -1.69
UBE3AQ05086 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
UBE3AQ05086 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
UBE3AQ05086 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
UBE3AQ05086 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
UBE3AQ05086 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.48□□□□□ -1.69
UBE3AQ05086 GDI2P1-201ENST00000429312 1336 ntBASIC4.47□□□□□ -1.69
UBE3AQ05086 AL136964.1-201ENST00000622038 2990 ntBASIC4.47□□□□□ -1.69
UBE3AQ05086 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
UBE3AQ05086 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UBE3AQ05086 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.47□□□□□ -1.69
UBE3AQ05086 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
UBE3AQ05086 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
UBE3AQ05086 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UBE3AQ05086 RNA5SP151-201ENST00000365632 117 ntBASIC4.47□□□□□ -1.69
UBE3AQ05086 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.47□□□□□ -1.69
UBE3AQ05086 MT-TC-201ENST00000387405 66 ntBASIC4.47□□□□□ -1.69
UBE3AQ05086 AF228730.1-201ENST00000397972 663 ntBASIC4.47□□□□□ -1.69
UBE3AQ05086 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UBE3AQ05086 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.47□□□□□ -1.69
UBE3AQ05086 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.47□□□□□ -1.69
UBE3AQ05086 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC4.47□□□□□ -1.69
UBE3AQ05086 OFD1P18Y-201ENST00000420889 959 ntBASIC4.47□□□□□ -1.69
UBE3AQ05086 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UBE3AQ05086 AL008629.1-201ENST00000438615 184 ntBASIC4.47□□□□□ -1.69
UBE3AQ05086 MTCYBP31-201ENST00000438855 1122 ntBASIC4.47□□□□□ -1.69
UBE3AQ05086 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
UBE3AQ05086 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.47□□□□□ -1.69
UBE3AQ05086 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
UBE3AQ05086 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.47□□□□□ -1.69
UBE3AQ05086 MTND1P31-201ENST00000449206 961 ntBASIC4.47□□□□□ -1.69
UBE3AQ05086 RPL26P28-201ENST00000451325 435 ntBASIC4.47□□□□□ -1.69
UBE3AQ05086 TRGVB-201ENST00000453257 471 ntBASIC4.47□□□□□ -1.69
UBE3AQ05086 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.47□□□□□ -1.69
UBE3AQ05086 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.47□□□□□ -1.69
UBE3AQ05086 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.47□□□□□ -1.69
UBE3AQ05086 PABPC1P3-201ENST00000469174 459 ntBASIC4.47□□□□□ -1.69
UBE3AQ05086 RPS15AP17-201ENST00000470598 390 ntBASIC4.47□□□□□ -1.69
UBE3AQ05086 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.47□□□□□ -1.69
UBE3AQ05086 AC108941.1-201ENST00000502853 530 ntBASIC4.47□□□□□ -1.69
UBE3AQ05086 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.47□□□□□ -1.69
UBE3AQ05086 TMEM248P1-201ENST00000510579 951 ntBASIC4.47□□□□□ -1.69
UBE3AQ05086 PAICSP4-201ENST00000517543 1253 ntBASIC4.47□□□□□ -1.69
UBE3AQ05086 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.47□□□□□ -1.69
UBE3AQ05086 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.47□□□□□ -1.69
UBE3AQ05086 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.47□□□□□ -1.69
UBE3AQ05086 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.47□□□□□ -1.69
UBE3AQ05086 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.47□□□□□ -1.69
UBE3AQ05086 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.47□□□□□ -1.69
UBE3AQ05086 LARP7P2-201ENST00000575306 125 ntBASIC4.47□□□□□ -1.69
UBE3AQ05086 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.47□□□□□ -1.69
UBE3AQ05086 MIR4637-201ENST00000582405 84 ntBASIC4.47□□□□□ -1.69
UBE3AQ05086 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.47□□□□□ -1.69
UBE3AQ05086 BNIP3P24-201ENST00000593398 557 ntBASIC4.47□□□□□ -1.69
UBE3AQ05086 AC004987.4-201ENST00000603383 338 ntBASIC4.47□□□□□ -1.69
UBE3AQ05086 AC103881.1-201ENST00000603476 538 ntBASIC4.47□□□□□ -1.69
UBE3AQ05086 AL160290.3-201ENST00000604869 165 ntBASIC4.47□□□□□ -1.69
UBE3AQ05086 AC010201.1-201ENST00000605051 540 ntBASIC4.47□□□□□ -1.69
UBE3AQ05086 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.47□□□□□ -1.69
UBE3AQ05086 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.47□□□□□ -1.69
UBE3AQ05086 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.47□□□□□ -1.69
UBE3AQ05086 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
UBE3AQ05086 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.47□□□□□ -1.69
UBE3AQ05086 CR392039.5-201ENST00000623201 510 ntBASIC4.47□□□□□ -1.69
UBE3AQ05086 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.47□□□□□ -1.69
UBE3AQ05086 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.47□□□□□ -1.69
UBE3AQ05086 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UBE3AQ05086 AC008013.2-202ENST00000637965 364 ntBASIC4.47□□□□□ -1.69
UBE3AQ05086 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UBE3AQ05086 MTND4P26-201ENST00000415971 1359 ntBASIC4.47□□□□□ -1.69
UBE3AQ05086 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
UBE3AQ05086 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
UBE3AQ05086 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UBE3AQ05086 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
UBE3AQ05086 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
UBE3AQ05086 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
UBE3AQ05086 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
UBE3AQ05086 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
UBE3AQ05086 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.46□□□□□ -1.69
UBE3AQ05086 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.46□□□□□ -1.69
UBE3AQ05086 MAPK10-303ENST00000641324 3959 ntBASIC4.46□□□□□ -1.7
UBE3AQ05086 SNORA71.3-201ENST00000362582 128 ntBASIC4.46□□□□□ -1.7
UBE3AQ05086 SNORD82-201ENST00000365530 70 ntBASIC4.46□□□□□ -1.7
UBE3AQ05086 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.46□□□□□ -1.7
UBE3AQ05086 CYP4F29P-201ENST00000420685 446 ntBASIC4.46□□□□□ -1.7
UBE3AQ05086 RWDD4P2-201ENST00000426392 563 ntBASIC4.46□□□□□ -1.7
UBE3AQ05086 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.46□□□□□ -1.7
UBE3AQ05086 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.46□□□□□ -1.7
UBE3AQ05086 MTND4P6-201ENST00000438297 472 ntBASIC4.46□□□□□ -1.7
UBE3AQ05086 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.46□□□□□ -1.7
UBE3AQ05086 AC104978.1-201ENST00000449387 391 ntBASIC4.46□□□□□ -1.7
UBE3AQ05086 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.46□□□□□ -1.7
UBE3AQ05086 FGF7P3-201ENST00000454645 303 ntBASIC4.46□□□□□ -1.7
UBE3AQ05086 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.46□□□□□ -1.7
UBE3AQ05086 RPL23AP65-201ENST00000475608 468 ntBASIC4.46□□□□□ -1.7
UBE3AQ05086 AC110792.1-201ENST00000491826 472 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms