Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CX3CL1P78423 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.56□□□□□ -1.84
CX3CL1P78423 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.56□□□□□ -1.84
CX3CL1P78423 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.56□□□□□ -1.84
CX3CL1P78423 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CX3CL1P78423 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.56□□□□□ -1.84
CX3CL1P78423 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.56□□□□□ -1.84
CX3CL1P78423 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CX3CL1P78423 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 AC053481.2-202ENST00000582394 1500 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 AL356473.1-201ENST00000406203 1408 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CX3CL1P78423 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.56□□□□□ -1.84
CX3CL1P78423 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CX3CL1P78423 RNU6-660P-201ENST00000364566 109 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 RNA5SP151-201ENST00000365632 117 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 RNU1-63P-201ENST00000383902 164 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 Y_RNA.560-201ENST00000384689 102 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CX3CL1P78423 RPS3AP23-201ENST00000401762 784 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 RPS15AP38-201ENST00000413110 372 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.56□□□□□ -1.84
CX3CL1P78423 RPL23AP39-201ENST00000415533 405 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.56□□□□□ -1.84
CX3CL1P78423 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.56□□□□□ -1.84
CX3CL1P78423 AC119751.6-201ENST00000416712 186 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 AC127526.1-201ENST00000417526 366 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.56□□□□□ -1.84
CX3CL1P78423 AC090960.1-201ENST00000421072 306 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CX3CL1P78423 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.56□□□□□ -1.84
CX3CL1P78423 AL590233.1-201ENST00000430017 456 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.56□□□□□ -1.84
CX3CL1P78423 HSPE1P28-201ENST00000443139 211 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.56□□□□□ -1.84
CX3CL1P78423 RPL23AP43-201ENST00000446445 471 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 AL451050.1-201ENST00000450126 415 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 SBDSP1-204ENST00000453858 737 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 SUMO2P2-201ENST00000456482 255 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 snoU13.3-201ENST00000459441 104 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 MTND3P7-201ENST00000474435 343 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.56□□□□□ -1.84
CX3CL1P78423 RNA5SP497-201ENST00000516081 97 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 RNU6-27P-201ENST00000516146 107 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 Y_RNA.688-201ENST00000516565 95 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 COX6CP8-201ENST00000522620 226 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC3.56□□□□□ -1.84
CX3CL1P78423 AP000827.1-201ENST00000527814 258 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 AC024224.1-201ENST00000538284 609 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 OR6C73P-201ENST00000546432 358 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.56□□□□□ -1.84
CX3CL1P78423 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.56□□□□□ -1.84
CX3CL1P78423 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.56□□□□□ -1.84
CX3CL1P78423 PSMB7P1-201ENST00000556349 514 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 AC084783.1-201ENST00000565846 910 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 AC012435.1-202ENST00000568772 240 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.56□□□□□ -1.84
CX3CL1P78423 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.56□□□□□ -1.84
CX3CL1P78423 BBIP1P1-201ENST00000602999 279 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 DUXAP11-201ENST00000603858 526 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 AC115286.1-201ENST00000604298 434 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.56□□□□□ -1.84
CX3CL1P78423 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.56□□□□□ -1.84
CX3CL1P78423 AL445264.1-201ENST00000621719 171 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 MIR4727-201ENST00000622232 55 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 AC040168.1-201ENST00000623594 991 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
CX3CL1P78423 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.56□□□□□ -1.84
CX3CL1P78423 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CX3CL1P78423 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.56□□□□□ -1.84
CX3CL1P78423 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CX3CL1P78423 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CX3CL1P78423 AC011266.1-201ENST00000624119 3569 ntBASIC3.56□□□□□ -1.84
CX3CL1P78423 AC097714.1-201ENST00000511272 1647 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 AC012321.1-201ENST00000561622 1588 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CX3CL1P78423 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.55□□□□□ -1.84
CX3CL1P78423 AL445523.1-201ENST00000451184 1362 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CX3CL1P78423 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.55□□□□□ -1.84
CX3CL1P78423 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CX3CL1P78423 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.55□□□□□ -1.84
CX3CL1P78423 RNU6-289P-201ENST00000364093 107 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CX3CL1P78423 MIR513A2-201ENST00000385249 127 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 CYB5AP4-201ENST00000396692 399 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CX3CL1P78423 RPL23AP48-201ENST00000406913 488 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 RNU2-15P-201ENST00000410692 191 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 HSFY4P-201ENST00000415994 1181 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 MTATP6P27-201ENST00000416987 621 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 UBTFL3-201ENST00000418934 1024 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.55□□□□□ -1.84
CX3CL1P78423 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.55□□□□□ -1.84
CX3CL1P78423 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.55□□□□□ -1.84
CX3CL1P78423 AC019178.2-201ENST00000423595 505 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 AC007742.1-201ENST00000425789 329 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.55□□□□□ -1.84
CX3CL1P78423 ELOCP26-201ENST00000436067 329 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms