Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 SNORA74D-201ENST00000516404 141 ntBASIC2.61□□□□□ -1.99
POLR2JP52435 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.61□□□□□ -1.99
POLR2JP52435 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.61□□□□□ -1.99
POLR2JP52435 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.61□□□□□ -1.99
POLR2JP52435 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.61□□□□□ -1.99
POLR2JP52435 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.61□□□□□ -1.99
POLR2JP52435 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC2.61□□□□□ -1.99
POLR2JP52435 AC024153.1-201ENST00000603103 365 ntBASIC2.61□□□□□ -1.99
POLR2JP52435 AC008739.3-201ENST00000603262 127 ntBASIC2.61□□□□□ -1.99
POLR2JP52435 AC091488.1-201ENST00000604239 660 ntBASIC2.61□□□□□ -1.99
POLR2JP52435 AC245389.1-201ENST00000605141 529 ntBASIC2.61□□□□□ -1.99
POLR2JP52435 YPEL5P2-201ENST00000605553 359 ntBASIC2.61□□□□□ -1.99
POLR2JP52435 AC016877.3-201ENST00000606778 504 ntBASIC2.61□□□□□ -1.99
POLR2JP52435 OR2BH1P-201ENST00000608850 864 ntBASIC2.61□□□□□ -1.99
POLR2JP52435 AC069200.1-201ENST00000609511 323 ntBASIC2.61□□□□□ -1.99
POLR2JP52435 AC005156.1-201ENST00000613371 573 ntBASIC2.61□□□□□ -1.99
POLR2JP52435 AL589935.2-201ENST00000616471 1231 ntBASIC2.61□□□□□ -1.99
POLR2JP52435 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.61□□□□□ -1.99
POLR2JP52435 RFC1-217ENST00000639695 867 ntTSL 5 BASIC2.61□□□□□ -1.99
POLR2JP52435 AL355578.1-201ENST00000607405 1328 ntBASIC2.61□□□□□ -1.99
POLR2JP52435 FAM35CP-201ENST00000554755 2470 ntBASIC2.61□□□□□ -1.99
POLR2JP52435 AC092447.7-201ENST00000422212 1621 ntBASIC2.6□□□□□ -1.99
POLR2JP52435 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
POLR2JP52435 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
POLR2JP52435 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
POLR2JP52435 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
POLR2JP52435 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
POLR2JP52435 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
POLR2JP52435 RNA5SP374-201ENST00000362939 125 ntBASIC2.6□□□□□ -1.99
POLR2JP52435 RNA5SP105-201ENST00000391123 113 ntBASIC2.6□□□□□ -1.99
POLR2JP52435 SNORA11C-201ENST00000408532 129 ntBASIC2.6□□□□□ -1.99
POLR2JP52435 NPM1P24-201ENST00000428039 894 ntBASIC2.6□□□□□ -1.99
POLR2JP52435 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.6□□□□□ -1.99
POLR2JP52435 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.6□□□□□ -1.99
POLR2JP52435 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC2.6□□□□□ -1.99
POLR2JP52435 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.6□□□□□ -1.99
POLR2JP52435 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC2.6□□□□□ -1.99
POLR2JP52435 HMGB1P5-202ENST00000451497 985 ntBASIC2.6□□□□□ -1.99
POLR2JP52435 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.6□□□□□ -1.99
POLR2JP52435 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.6□□□□□ -1.99
POLR2JP52435 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC2.6□□□□□ -1.99
POLR2JP52435 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.6□□□□□ -1.99
POLR2JP52435 AL358832.1-201ENST00000497800 389 ntBASIC2.6□□□□□ -1.99
POLR2JP52435 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.6□□□□□ -1.99
POLR2JP52435 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC2.6□□□□□ -1.99
POLR2JP52435 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.6□□□□□ -1.99
POLR2JP52435 AC005412.1-201ENST00000580812 1049 ntBASIC2.6□□□□□ -1.99
POLR2JP52435 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
POLR2JP52435 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.6□□□□□ -1.99
POLR2JP52435 AL451074.6-201ENST00000608512 729 ntBASIC2.6□□□□□ -1.99
POLR2JP52435 BX664608.1-201ENST00000610519 487 ntBASIC2.6□□□□□ -1.99
POLR2JP52435 AL359198.2-201ENST00000611836 194 ntBASIC2.6□□□□□ -1.99
POLR2JP52435 DCAF13P1-201ENST00000495256 1330 ntBASIC2.6□□□□□ -1.99
POLR2JP52435 AC109315.1-201ENST00000584143 1347 ntBASIC2.6□□□□□ -1.99
POLR2JP52435 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.6□□□□□ -1.99
POLR2JP52435 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
POLR2JP52435 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.59□□□□□ -1.99
POLR2JP52435 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.59□□□□□ -1.99
POLR2JP52435 MIR422A-201ENST00000362286 90 ntBASIC2.59□□□□□ -1.99
POLR2JP52435 U8.9-201ENST00000365667 134 ntBASIC2.59□□□□□ -1.99
POLR2JP52435 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
POLR2JP52435 HSPE1P26-201ENST00000405341 275 ntBASIC2.59□□□□□ -1.99
POLR2JP52435 AL031121.1-201ENST00000406553 254 ntBASIC2.59□□□□□ -1.99
POLR2JP52435 RPS3AP25-201ENST00000411660 793 ntBASIC2.59□□□□□ -1.99
POLR2JP52435 RPS20P25-201ENST00000412447 352 ntBASIC2.59□□□□□ -1.99
POLR2JP52435 RPL7P46-201ENST00000425129 740 ntBASIC2.59□□□□□ -1.99
POLR2JP52435 AC073069.1-201ENST00000428657 441 ntBASIC2.59□□□□□ -1.99
POLR2JP52435 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.59□□□□□ -1.99
POLR2JP52435 RNU6-1218P-201ENST00000458990 108 ntBASIC2.59□□□□□ -1.99
POLR2JP52435 AC010627.1-201ENST00000503819 1294 ntBASIC2.59□□□□□ -1.99
POLR2JP52435 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.59□□□□□ -1.99
POLR2JP52435 HMGB3P15-201ENST00000507326 574 ntBASIC2.59□□□□□ -1.99
POLR2JP52435 AC111000.2-201ENST00000507775 550 ntBASIC2.59□□□□□ -1.99
POLR2JP52435 MTND4LP22-201ENST00000508209 276 ntBASIC2.59□□□□□ -1.99
POLR2JP52435 AC026412.2-201ENST00000512270 1075 ntBASIC2.59□□□□□ -1.99
POLR2JP52435 OR8L1P-201ENST00000534005 955 ntBASIC2.59□□□□□ -1.99
POLR2JP52435 AC096586.2-201ENST00000610260 441 ntBASIC2.59□□□□□ -1.99
POLR2JP52435 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC2.59□□□□□ -1.99
POLR2JP52435 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
POLR2JP52435 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.59□□□□□ -2
POLR2JP52435 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
POLR2JP52435 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
POLR2JP52435 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC2.58□□□□□ -2
POLR2JP52435 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
POLR2JP52435 AL138885.1-201ENST00000405921 675 ntBASIC2.58□□□□□ -2
POLR2JP52435 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.58□□□□□ -2
POLR2JP52435 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.58□□□□□ -2
POLR2JP52435 AC112220.1-201ENST00000434628 355 ntBASIC2.58□□□□□ -2
POLR2JP52435 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.58□□□□□ -2
POLR2JP52435 RPL6P5-201ENST00000445678 828 ntBASIC2.58□□□□□ -2
POLR2JP52435 SNORD108-201ENST00000459332 71 ntBASIC2.58□□□□□ -2
POLR2JP52435 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.58□□□□□ -2
POLR2JP52435 TBCAP3-201ENST00000512475 312 ntBASIC2.58□□□□□ -2
POLR2JP52435 RN7SKP57-201ENST00000517248 293 ntBASIC2.58□□□□□ -2
POLR2JP52435 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.58□□□□□ -2
POLR2JP52435 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.58□□□□□ -2
POLR2JP52435 AC004486.1-201ENST00000546846 233 ntBASIC2.58□□□□□ -2
POLR2JP52435 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.58□□□□□ -2
POLR2JP52435 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.58□□□□□ -2
POLR2JP52435 AC105036.1-201ENST00000566222 271 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms