Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 RNU4-5P-201ENST00000607255 135 ntBASIC3.32□□□□□ -1.88
ATRXP46100 THAP12P5-201ENST00000405864 2275 ntBASIC3.32□□□□□ -1.88
ATRXP46100 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.32□□□□□ -1.88
ATRXP46100 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.32□□□□□ -1.88
ATRXP46100 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
ATRXP46100 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
ATRXP46100 AL022393.1-201ENST00000625142 1677 ntBASIC3.31□□□□□ -1.88
ATRXP46100 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
ATRXP46100 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
ATRXP46100 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.31□□□□□ -1.88
ATRXP46100 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.31□□□□□ -1.88
ATRXP46100 ARL5AP3-201ENST00000439327 386 ntBASIC3.31□□□□□ -1.88
ATRXP46100 EXTL2P1-201ENST00000446218 416 ntBASIC3.31□□□□□ -1.88
ATRXP46100 ZNF886P-201ENST00000450781 723 ntBASIC3.31□□□□□ -1.88
ATRXP46100 RPL23AP44-201ENST00000482216 473 ntBASIC3.31□□□□□ -1.88
ATRXP46100 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ATRXP46100 HMGB1P21-201ENST00000502313 581 ntBASIC3.31□□□□□ -1.88
ATRXP46100 PTGES3P3-201ENST00000511479 482 ntBASIC3.31□□□□□ -1.88
ATRXP46100 AC093770.1-201ENST00000511559 571 ntBASIC3.31□□□□□ -1.88
ATRXP46100 AC008413.1-201ENST00000511864 177 ntBASIC3.31□□□□□ -1.88
ATRXP46100 RNA5SP230-201ENST00000517039 122 ntBASIC3.31□□□□□ -1.88
ATRXP46100 UBTFL10-201ENST00000528532 562 ntBASIC3.31□□□□□ -1.88
ATRXP46100 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC3.31□□□□□ -1.88
ATRXP46100 MRPS36P5-201ENST00000551909 298 ntBASIC3.31□□□□□ -1.88
ATRXP46100 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.31□□□□□ -1.88
ATRXP46100 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.31□□□□□ -1.88
ATRXP46100 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.31□□□□□ -1.88
ATRXP46100 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.31□□□□□ -1.88
ATRXP46100 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
ATRXP46100 AC007349.4-201ENST00000608114 532 ntBASIC3.31□□□□□ -1.88
ATRXP46100 AC015922.4-201ENST00000612568 690 ntBASIC3.31□□□□□ -1.88
ATRXP46100 AC091304.6-201ENST00000619761 202 ntBASIC3.31□□□□□ -1.88
ATRXP46100 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.31□□□□□ -1.88
ATRXP46100 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.31□□□□□ -1.88
ATRXP46100 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ATRXP46100 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ATRXP46100 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
ATRXP46100 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.31□□□□□ -1.88
ATRXP46100 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.31□□□□□ -1.88
ATRXP46100 BX323014.1-201ENST00000412876 237 ntBASIC3.31□□□□□ -1.88
ATRXP46100 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.31□□□□□ -1.88
ATRXP46100 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.31□□□□□ -1.88
ATRXP46100 USP9YP28-201ENST00000435142 589 ntBASIC3.31□□□□□ -1.88
ATRXP46100 AC000041.1-201ENST00000439655 175 ntBASIC3.31□□□□□ -1.88
ATRXP46100 WASF1P1-201ENST00000447560 1131 ntBASIC3.31□□□□□ -1.88
ATRXP46100 AC097262.1-201ENST00000452559 548 ntBASIC3.31□□□□□ -1.88
ATRXP46100 AC008379.1-201ENST00000463655 464 ntBASIC3.31□□□□□ -1.88
ATRXP46100 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.31□□□□□ -1.88
ATRXP46100 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.31□□□□□ -1.88
ATRXP46100 AC091826.1-201ENST00000514065 313 ntBASIC3.31□□□□□ -1.88
ATRXP46100 AC006518.2-201ENST00000542513 940 ntBASIC3.31□□□□□ -1.88
ATRXP46100 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ATRXP46100 AC061975.8-201ENST00000587058 721 ntBASIC3.31□□□□□ -1.88
ATRXP46100 ELOCP29-201ENST00000588193 334 ntBASIC3.31□□□□□ -1.88
ATRXP46100 ZNF92P3-201ENST00000596594 954 ntBASIC3.31□□□□□ -1.88
ATRXP46100 AP002802.2-201ENST00000605877 235 ntBASIC3.31□□□□□ -1.88
ATRXP46100 AC092954.1-201ENST00000609121 445 ntBASIC3.31□□□□□ -1.88
ATRXP46100 MIR7851-201ENST00000610611 160 ntBASIC3.31□□□□□ -1.88
ATRXP46100 AL354976.1-201ENST00000613843 387 ntBASIC3.31□□□□□ -1.88
ATRXP46100 AC021755.4-201ENST00000616620 456 ntBASIC3.31□□□□□ -1.88
ATRXP46100 AC092140.2-201ENST00000618027 521 ntBASIC3.31□□□□□ -1.88
ATRXP46100 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ATRXP46100 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.31□□□□□ -1.88
ATRXP46100 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ATRXP46100 OR10AB1P-202ENST00000641219 1686 ntBASIC3.31□□□□□ -1.88
ATRXP46100 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.3□□□□□ -1.88
ATRXP46100 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
ATRXP46100 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ATRXP46100 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.3□□□□□ -1.88
ATRXP46100 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.3□□□□□ -1.88
ATRXP46100 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.3□□□□□ -1.88
ATRXP46100 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.3□□□□□ -1.88
ATRXP46100 RPL26P37-201ENST00000411983 438 ntBASIC3.3□□□□□ -1.88
ATRXP46100 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.3□□□□□ -1.88
ATRXP46100 MTCO3P4-201ENST00000419236 787 ntBASIC3.3□□□□□ -1.88
ATRXP46100 AL365338.1-201ENST00000422282 858 ntBASIC3.3□□□□□ -1.88
ATRXP46100 MTND1P20-201ENST00000430341 950 ntBASIC3.3□□□□□ -1.88
ATRXP46100 BUD31P2-201ENST00000449374 300 ntBASIC3.3□□□□□ -1.88
ATRXP46100 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.3□□□□□ -1.88
ATRXP46100 AC092155.2-201ENST00000454675 477 ntBASIC3.3□□□□□ -1.88
ATRXP46100 snoU13.18-201ENST00000459483 104 ntBASIC3.3□□□□□ -1.88
ATRXP46100 SYT14P1-201ENST00000481459 721 ntBASIC3.3□□□□□ -1.88
ATRXP46100 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.3□□□□□ -1.88
ATRXP46100 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
ATRXP46100 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.3□□□□□ -1.88
ATRXP46100 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.3□□□□□ -1.88
ATRXP46100 AC118942.1-201ENST00000529674 1035 ntBASIC3.3□□□□□ -1.88
ATRXP46100 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.3□□□□□ -1.88
ATRXP46100 AC022968.1-201ENST00000567372 442 ntBASIC3.3□□□□□ -1.88
ATRXP46100 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.3□□□□□ -1.88
ATRXP46100 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.3□□□□□ -1.88
ATRXP46100 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.3□□□□□ -1.88
ATRXP46100 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
ATRXP46100 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
ATRXP46100 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ATRXP46100 AC017002.4-201ENST00000604721 1525 ntBASIC3.3□□□□□ -1.88
ATRXP46100 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
ATRXP46100 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
ATRXP46100 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ATRXP46100 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms