Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 NPM1P24-201ENST00000428039 894 ntBASIC3.51□□□□□ -1.85
SCN4AP35499 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.51□□□□□ -1.85
SCN4AP35499 AC021205.2-201ENST00000480069 347 ntBASIC3.51□□□□□ -1.85
SCN4AP35499 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.51□□□□□ -1.85
SCN4AP35499 SCGB1D5P-201ENST00000515134 247 ntBASIC3.51□□□□□ -1.85
SCN4AP35499 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.51□□□□□ -1.85
SCN4AP35499 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.51□□□□□ -1.85
SCN4AP35499 PDCD5P1-201ENST00000543528 309 ntBASIC3.51□□□□□ -1.85
SCN4AP35499 CBX3P5-201ENST00000552017 521 ntBASIC3.51□□□□□ -1.85
SCN4AP35499 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.51□□□□□ -1.85
SCN4AP35499 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.51□□□□□ -1.85
SCN4AP35499 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.51□□□□□ -1.85
SCN4AP35499 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.51□□□□□ -1.85
SCN4AP35499 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.51□□□□□ -1.85
SCN4AP35499 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SCN4AP35499 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SCN4AP35499 AC007496.3-201ENST00000624987 3443 ntBASIC3.5□□□□□ -1.85
SCN4AP35499 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SCN4AP35499 U3.42-201ENST00000408746 214 ntBASIC3.5□□□□□ -1.85
SCN4AP35499 AC099063.2-201ENST00000446360 662 ntBASIC3.5□□□□□ -1.85
SCN4AP35499 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.5□□□□□ -1.85
SCN4AP35499 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.5□□□□□ -1.85
SCN4AP35499 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.5□□□□□ -1.85
SCN4AP35499 EIF1AXP2-201ENST00000555940 413 ntBASIC3.5□□□□□ -1.85
SCN4AP35499 AC079089.3-201ENST00000603094 673 ntBASIC3.5□□□□□ -1.85
SCN4AP35499 AC096947.1-201ENST00000603233 470 ntBASIC3.5□□□□□ -1.85
SCN4AP35499 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.5□□□□□ -1.85
SCN4AP35499 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
SCN4AP35499 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SCN4AP35499 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SCN4AP35499 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SCN4AP35499 RNA5SP21-201ENST00000410917 96 ntBASIC3.49□□□□□ -1.85
SCN4AP35499 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC3.49□□□□□ -1.85
SCN4AP35499 AP000936.2-201ENST00000447151 681 ntBASIC3.49□□□□□ -1.85
SCN4AP35499 AC104058.1-201ENST00000448028 297 ntBASIC3.49□□□□□ -1.85
SCN4AP35499 RPL31P13-201ENST00000484151 370 ntBASIC3.49□□□□□ -1.85
SCN4AP35499 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.49□□□□□ -1.85
SCN4AP35499 AC008413.1-201ENST00000511864 177 ntBASIC3.49□□□□□ -1.85
SCN4AP35499 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.49□□□□□ -1.85
SCN4AP35499 EEF1A1P37-201ENST00000522748 715 ntBASIC3.49□□□□□ -1.85
SCN4AP35499 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SCN4AP35499 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.49□□□□□ -1.85
SCN4AP35499 AC090312.2-201ENST00000582687 378 ntBASIC3.49□□□□□ -1.85
SCN4AP35499 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SCN4AP35499 MIR365B-201ENST00000362317 111 ntBASIC3.49□□□□□ -1.85
SCN4AP35499 SKINT1L-201ENST00000401057 817 ntBASIC3.49□□□□□ -1.85
SCN4AP35499 MRPL50P2-201ENST00000416821 482 ntBASIC3.49□□□□□ -1.85
SCN4AP35499 GTF2IP23-201ENST00000423746 351 ntBASIC3.49□□□□□ -1.85
SCN4AP35499 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.49□□□□□ -1.85
SCN4AP35499 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.49□□□□□ -1.85
SCN4AP35499 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.49□□□□□ -1.85
SCN4AP35499 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC3.49□□□□□ -1.85
SCN4AP35499 RNA5SP217-201ENST00000515959 91 ntBASIC3.49□□□□□ -1.85
SCN4AP35499 AL389895.1-201ENST00000554127 252 ntBASIC3.49□□□□□ -1.85
SCN4AP35499 AL358913.1-201ENST00000554342 121 ntBASIC3.49□□□□□ -1.85
SCN4AP35499 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.49□□□□□ -1.85
SCN4AP35499 PLCE1P1-201ENST00000622094 305 ntBASIC3.49□□□□□ -1.85
SCN4AP35499 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SCN4AP35499 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
SCN4AP35499 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
SCN4AP35499 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.48□□□□□ -1.85
SCN4AP35499 CDC27P2-201ENST00000425026 1922 ntBASIC3.48□□□□□ -1.85
SCN4AP35499 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SCN4AP35499 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SCN4AP35499 U8.2-201ENST00000363156 134 ntBASIC3.48□□□□□ -1.85
SCN4AP35499 AL139039.1-201ENST00000401900 692 ntBASIC3.48□□□□□ -1.85
SCN4AP35499 RNU2-22P-201ENST00000411266 212 ntBASIC3.48□□□□□ -1.85
SCN4AP35499 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.48□□□□□ -1.85
SCN4AP35499 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.48□□□□□ -1.85
SCN4AP35499 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.48□□□□□ -1.85
SCN4AP35499 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.48□□□□□ -1.85
SCN4AP35499 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.48□□□□□ -1.85
SCN4AP35499 EIF2S2P4-201ENST00000461070 984 ntBASIC3.48□□□□□ -1.85
SCN4AP35499 RPS27P29-201ENST00000463110 252 ntBASIC3.48□□□□□ -1.85
SCN4AP35499 AC117522.3-201ENST00000507974 584 ntBASIC3.48□□□□□ -1.85
SCN4AP35499 FABP5P12-201ENST00000515543 389 ntBASIC3.48□□□□□ -1.85
SCN4AP35499 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.48□□□□□ -1.85
SCN4AP35499 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.48□□□□□ -1.85
SCN4AP35499 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.48□□□□□ -1.85
SCN4AP35499 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.48□□□□□ -1.85
SCN4AP35499 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SCN4AP35499 ELL2P4-201ENST00000446870 1376 ntBASIC3.48□□□□□ -1.85
SCN4AP35499 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
SCN4AP35499 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.48□□□□□ -1.85
SCN4AP35499 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
SCN4AP35499 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.48□□□□□ -1.85
SCN4AP35499 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SCN4AP35499 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SCN4AP35499 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SCN4AP35499 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SCN4AP35499 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SCN4AP35499 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SCN4AP35499 RNA5SP68-201ENST00000363885 119 ntBASIC3.47□□□□□ -1.85
SCN4AP35499 AC069218.2-201ENST00000411665 344 ntBASIC3.47□□□□□ -1.85
SCN4AP35499 HMGB1P18-201ENST00000438801 619 ntBASIC3.47□□□□□ -1.85
SCN4AP35499 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.47□□□□□ -1.85
SCN4AP35499 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SCN4AP35499 AC147055.1-201ENST00000509261 750 ntBASIC3.47□□□□□ -1.85
SCN4AP35499 NPM1P52-201ENST00000518264 846 ntBASIC3.47□□□□□ -1.85
SCN4AP35499 AL158827.2-201ENST00000602494 330 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms