Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC010587.2-201ENST00000511727 448 ntBASIC4.56□□□□□ -1.68
CIITAP33076 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.56□□□□□ -1.68
CIITAP33076 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.56□□□□□ -1.68
CIITAP33076 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.56□□□□□ -1.68
CIITAP33076 AC069240.1-201ENST00000548774 375 ntBASIC4.56□□□□□ -1.68
CIITAP33076 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.56□□□□□ -1.68
CIITAP33076 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.56□□□□□ -1.68
CIITAP33076 AC011260.1-201ENST00000578420 472 ntBASIC4.56□□□□□ -1.68
CIITAP33076 MIR3915-201ENST00000578518 97 ntBASIC4.56□□□□□ -1.68
CIITAP33076 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.56□□□□□ -1.68
CIITAP33076 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.56□□□□□ -1.68
CIITAP33076 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.56□□□□□ -1.68
CIITAP33076 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CIITAP33076 AC121761.2-201ENST00000617300 689 ntBASIC4.56□□□□□ -1.68
CIITAP33076 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.56□□□□□ -1.68
CIITAP33076 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.56□□□□□ -1.68
CIITAP33076 AC073348.1-201ENST00000623002 331 ntBASIC4.56□□□□□ -1.68
CIITAP33076 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CIITAP33076 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.56□□□□□ -1.68
CIITAP33076 OR5BE1P-202ENST00000641168 1176 ntBASIC4.56□□□□□ -1.68
CIITAP33076 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CIITAP33076 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
CIITAP33076 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CIITAP33076 AC011266.1-201ENST00000624119 3569 ntBASIC4.56□□□□□ -1.68
CIITAP33076 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CIITAP33076 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.56□□□□□ -1.68
CIITAP33076 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CIITAP33076 AL445523.1-201ENST00000451184 1362 ntBASIC4.55□□□□□ -1.68
CIITAP33076 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CIITAP33076 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CIITAP33076 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.55□□□□□ -1.68
CIITAP33076 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CIITAP33076 AC090229.1-201ENST00000590983 1609 ntBASIC4.55□□□□□ -1.68
CIITAP33076 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CIITAP33076 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CIITAP33076 RNU6-839P-201ENST00000363347 108 ntBASIC4.55□□□□□ -1.68
CIITAP33076 SNORD35B-201ENST00000363660 87 ntBASIC4.55□□□□□ -1.68
CIITAP33076 RNU6-931P-201ENST00000363850 107 ntBASIC4.55□□□□□ -1.68
CIITAP33076 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CIITAP33076 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.55□□□□□ -1.68
CIITAP33076 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.55□□□□□ -1.68
CIITAP33076 DPRXP1-201ENST00000426312 460 ntBASIC4.55□□□□□ -1.68
CIITAP33076 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.55□□□□□ -1.68
CIITAP33076 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.55□□□□□ -1.68
CIITAP33076 RPL37P1-201ENST00000432310 284 ntBASIC4.55□□□□□ -1.68
CIITAP33076 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.55□□□□□ -1.68
CIITAP33076 MTCO2P25-201ENST00000447065 681 ntBASIC4.55□□□□□ -1.68
CIITAP33076 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.55□□□□□ -1.68
CIITAP33076 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.55□□□□□ -1.68
CIITAP33076 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.55□□□□□ -1.68
CIITAP33076 SYPL1P1-201ENST00000473622 768 ntBASIC4.55□□□□□ -1.68
CIITAP33076 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.55□□□□□ -1.68
CIITAP33076 AC080014.1-201ENST00000496877 1201 ntBASIC4.55□□□□□ -1.68
CIITAP33076 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.55□□□□□ -1.68
CIITAP33076 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.55□□□□□ -1.68
CIITAP33076 RNU6-1225P-201ENST00000516336 65 ntBASIC4.55□□□□□ -1.68
CIITAP33076 IGKV2-38-201ENST00000517443 247 ntBASIC4.55□□□□□ -1.68
CIITAP33076 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.55□□□□□ -1.68
CIITAP33076 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.55□□□□□ -1.68
CIITAP33076 UBE2NP1-201ENST00000545592 458 ntBASIC4.55□□□□□ -1.68
CIITAP33076 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.55□□□□□ -1.68
CIITAP33076 ISCA1P3-201ENST00000577104 373 ntBASIC4.55□□□□□ -1.68
CIITAP33076 AC103987.3-201ENST00000582071 292 ntBASIC4.55□□□□□ -1.68
CIITAP33076 AC068790.2-201ENST00000602601 557 ntBASIC4.55□□□□□ -1.68
CIITAP33076 AP001981.2-201ENST00000603241 418 ntBASIC4.55□□□□□ -1.68
CIITAP33076 AC103881.1-201ENST00000603476 538 ntBASIC4.55□□□□□ -1.68
CIITAP33076 AP003973.1-201ENST00000604639 691 ntBASIC4.55□□□□□ -1.68
CIITAP33076 AL163642.2-201ENST00000604722 1019 ntBASIC4.55□□□□□ -1.68
CIITAP33076 AL592221.1-201ENST00000605266 382 ntBASIC4.55□□□□□ -1.68
CIITAP33076 AC098679.4-201ENST00000624241 654 ntBASIC4.55□□□□□ -1.68
CIITAP33076 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.55□□□□□ -1.68
CIITAP33076 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.55□□□□□ -1.68
CIITAP33076 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CIITAP33076 AC011978.2-201ENST00000569835 2054 ntBASIC4.55□□□□□ -1.68
CIITAP33076 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
CIITAP33076 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.55□□□□□ -1.68
CIITAP33076 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.55□□□□□ -1.68
CIITAP33076 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CIITAP33076 MTND4P26-201ENST00000415971 1359 ntBASIC4.54□□□□□ -1.68
CIITAP33076 MTND4P34-201ENST00000572715 1371 ntBASIC4.54□□□□□ -1.68
CIITAP33076 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CIITAP33076 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.54□□□□□ -1.68
CIITAP33076 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.54□□□□□ -1.68
CIITAP33076 Z82217.1-201ENST00000625157 8149 ntBASIC4.54□□□□□ -1.68
CIITAP33076 Y_RNA.201-201ENST00000364052 96 ntBASIC4.54□□□□□ -1.68
CIITAP33076 RN7SKP280-201ENST00000364196 304 ntBASIC4.54□□□□□ -1.68
CIITAP33076 RNU6-621P-201ENST00000364752 109 ntBASIC4.54□□□□□ -1.68
CIITAP33076 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CIITAP33076 MIR1193-201ENST00000408109 78 ntBASIC4.54□□□□□ -1.68
CIITAP33076 RNU4-6P-201ENST00000410804 122 ntBASIC4.54□□□□□ -1.68
CIITAP33076 AL160275.2-201ENST00000412010 394 ntBASIC4.54□□□□□ -1.68
CIITAP33076 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.54□□□□□ -1.68
CIITAP33076 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.54□□□□□ -1.68
CIITAP33076 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.54□□□□□ -1.68
CIITAP33076 MTCO3P5-201ENST00000433620 714 ntBASIC4.54□□□□□ -1.68
CIITAP33076 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.54□□□□□ -1.68
CIITAP33076 MTCYBP34-201ENST00000439552 670 ntBASIC4.54□□□□□ -1.68
CIITAP33076 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.54□□□□□ -1.68
CIITAP33076 TAF9P1-201ENST00000445421 515 ntBASIC4.54□□□□□ -1.68
CIITAP33076 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms