Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.11□□□□□ -1.75
PTPRMP28827 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC4.11□□□□□ -1.75
PTPRMP28827 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.11□□□□□ -1.75
PTPRMP28827 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.11□□□□□ -1.75
PTPRMP28827 AC146507.2-201ENST00000460608 476 ntBASIC4.11□□□□□ -1.75
PTPRMP28827 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.11□□□□□ -1.75
PTPRMP28827 OR5H3P-201ENST00000502817 919 ntBASIC4.11□□□□□ -1.75
PTPRMP28827 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC4.11□□□□□ -1.75
PTPRMP28827 OOSP1P2-201ENST00000579644 351 ntBASIC4.11□□□□□ -1.75
PTPRMP28827 AP001004.1-201ENST00000582468 324 ntBASIC4.11□□□□□ -1.75
PTPRMP28827 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PTPRMP28827 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PTPRMP28827 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
PTPRMP28827 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.1□□□□□ -1.75
PTPRMP28827 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PTPRMP28827 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTPRMP28827 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PTPRMP28827 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
PTPRMP28827 Z98941.1-201ENST00000407764 100 ntBASIC4.1□□□□□ -1.75
PTPRMP28827 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.1□□□□□ -1.75
PTPRMP28827 AC124916.1-201ENST00000444020 547 ntBASIC4.1□□□□□ -1.75
PTPRMP28827 RNA5SP217-201ENST00000515959 91 ntBASIC4.1□□□□□ -1.75
PTPRMP28827 RN7SKP219-201ENST00000516825 296 ntBASIC4.1□□□□□ -1.75
PTPRMP28827 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.1□□□□□ -1.75
PTPRMP28827 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.1□□□□□ -1.75
PTPRMP28827 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.1□□□□□ -1.75
PTPRMP28827 AC015911.5-201ENST00000587076 451 ntBASIC4.1□□□□□ -1.75
PTPRMP28827 AL365503.1-201ENST00000605247 905 ntBASIC4.1□□□□□ -1.75
PTPRMP28827 AL451049.1-201ENST00000608672 497 ntBASIC4.1□□□□□ -1.75
PTPRMP28827 AC123768.4-201ENST00000616244 701 ntBASIC4.1□□□□□ -1.75
PTPRMP28827 AL122125.1-201ENST00000616999 600 ntBASIC4.1□□□□□ -1.75
PTPRMP28827 AC004925.1-201ENST00000624256 2706 ntBASIC4.1□□□□□ -1.75
PTPRMP28827 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.1□□□□□ -1.75
PTPRMP28827 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.1□□□□□ -1.75
PTPRMP28827 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.09□□□□□ -1.75
PTPRMP28827 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PTPRMP28827 RNU1-75P-201ENST00000347264 129 ntBASIC4.09□□□□□ -1.75
PTPRMP28827 AL356057.3-201ENST00000402607 340 ntBASIC4.09□□□□□ -1.75
PTPRMP28827 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PTPRMP28827 AC127526.1-201ENST00000417526 366 ntBASIC4.09□□□□□ -1.75
PTPRMP28827 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.09□□□□□ -1.75
PTPRMP28827 RPS26P40-201ENST00000435209 294 ntBASIC4.09□□□□□ -1.75
PTPRMP28827 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.09□□□□□ -1.75
PTPRMP28827 ST13P14-201ENST00000474095 734 ntBASIC4.09□□□□□ -1.75
PTPRMP28827 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.09□□□□□ -1.75
PTPRMP28827 FABP5P12-201ENST00000515543 389 ntBASIC4.09□□□□□ -1.75
PTPRMP28827 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.09□□□□□ -1.75
PTPRMP28827 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.09□□□□□ -1.75
PTPRMP28827 NF1P10-201ENST00000613227 742 ntBASIC4.09□□□□□ -1.75
PTPRMP28827 AL049555.1-201ENST00000562834 1933 ntBASIC4.09□□□□□ -1.76
PTPRMP28827 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PTPRMP28827 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
PTPRMP28827 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.08□□□□□ -1.76
PTPRMP28827 Y_RNA.269-201ENST00000364685 89 ntBASIC4.08□□□□□ -1.76
PTPRMP28827 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC4.08□□□□□ -1.76
PTPRMP28827 OR2B8P-201ENST00000432841 938 ntBASIC4.08□□□□□ -1.76
PTPRMP28827 AC005351.1-201ENST00000511152 786 ntBASIC4.08□□□□□ -1.76
PTPRMP28827 RN7SKP60-201ENST00000516985 239 ntBASIC4.08□□□□□ -1.76
PTPRMP28827 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.08□□□□□ -1.76
PTPRMP28827 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.08□□□□□ -1.76
PTPRMP28827 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.08□□□□□ -1.76
PTPRMP28827 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC4.08□□□□□ -1.76
PTPRMP28827 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.08□□□□□ -1.76
PTPRMP28827 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
PTPRMP28827 MTCO1P22-201ENST00000604619 1360 ntBASIC4.08□□□□□ -1.76
PTPRMP28827 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
PTPRMP28827 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
PTPRMP28827 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTPRMP28827 AC026523.2-201ENST00000625039 7739 ntBASIC4.08□□□□□ -1.76
PTPRMP28827 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.08□□□□□ -1.76
PTPRMP28827 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PTPRMP28827 FAR1P1-201ENST00000427163 934 ntBASIC4.07□□□□□ -1.76
PTPRMP28827 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PTPRMP28827 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.07□□□□□ -1.76
PTPRMP28827 RPL23AP15-201ENST00000450202 459 ntBASIC4.07□□□□□ -1.76
PTPRMP28827 AC096725.1-201ENST00000514266 313 ntBASIC4.07□□□□□ -1.76
PTPRMP28827 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.07□□□□□ -1.76
PTPRMP28827 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PTPRMP28827 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.07□□□□□ -1.76
PTPRMP28827 MTCO1P7-201ENST00000419523 1542 ntBASIC4.07□□□□□ -1.76
PTPRMP28827 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PTPRMP28827 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PTPRMP28827 AL031985.3-201ENST00000565390 2449 ntBASIC4.07□□□□□ -1.76
PTPRMP28827 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.06□□□□□ -1.76
PTPRMP28827 Y_RNA.796-201ENST00000364268 102 ntBASIC4.06□□□□□ -1.76
PTPRMP28827 Y_RNA.799-201ENST00000364992 102 ntBASIC4.06□□□□□ -1.76
PTPRMP28827 GTF2IP23-201ENST00000423746 351 ntBASIC4.06□□□□□ -1.76
PTPRMP28827 AL365396.1-201ENST00000430854 671 ntBASIC4.06□□□□□ -1.76
PTPRMP28827 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
PTPRMP28827 RPS6P2-201ENST00000454208 705 ntBASIC4.06□□□□□ -1.76
PTPRMP28827 RN7SL499P-201ENST00000481141 276 ntBASIC4.06□□□□□ -1.76
PTPRMP28827 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.06□□□□□ -1.76
PTPRMP28827 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.06□□□□□ -1.76
PTPRMP28827 Z82195.1-201ENST00000604558 398 ntBASIC4.06□□□□□ -1.76
PTPRMP28827 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.06□□□□□ -1.76
PTPRMP28827 AC241377.1-201ENST00000619797 406 ntBASIC4.06□□□□□ -1.76
PTPRMP28827 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
PTPRMP28827 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.06□□□□□ -1.76
PTPRMP28827 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTPRMP28827 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms