Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC2.85□□□□□ -1.95
COL5A1P20908 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.85□□□□□ -1.95
COL5A1P20908 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.85□□□□□ -1.95
COL5A1P20908 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
COL5A1P20908 AC117522.3-201ENST00000507974 584 ntBASIC2.85□□□□□ -1.95
COL5A1P20908 MTCYBP19-201ENST00000517463 1124 ntBASIC2.85□□□□□ -1.95
COL5A1P20908 TRAV11-201ENST00000539512 339 ntBASIC2.85□□□□□ -1.95
COL5A1P20908 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.85□□□□□ -1.95
COL5A1P20908 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.85□□□□□ -1.95
COL5A1P20908 MIR5047-201ENST00000579212 100 ntBASIC2.85□□□□□ -1.95
COL5A1P20908 AC090312.2-201ENST00000582687 378 ntBASIC2.85□□□□□ -1.95
COL5A1P20908 AC009159.1-201ENST00000618386 642 ntBASIC2.85□□□□□ -1.95
COL5A1P20908 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
COL5A1P20908 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
COL5A1P20908 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
COL5A1P20908 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
COL5A1P20908 AC013470.3-201ENST00000420252 1194 ntBASIC2.84□□□□□ -1.95
COL5A1P20908 TRIM60P13-201ENST00000432350 1283 ntBASIC2.84□□□□□ -1.95
COL5A1P20908 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.84□□□□□ -1.95
COL5A1P20908 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.84□□□□□ -1.95
COL5A1P20908 NIPA2P5-201ENST00000452282 464 ntBASIC2.84□□□□□ -1.95
COL5A1P20908 AC147055.1-201ENST00000509261 750 ntBASIC2.84□□□□□ -1.95
COL5A1P20908 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
COL5A1P20908 AP003168.1-201ENST00000530091 307 ntBASIC2.84□□□□□ -1.95
COL5A1P20908 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.84□□□□□ -1.95
COL5A1P20908 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
COL5A1P20908 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC2.84□□□□□ -1.95
COL5A1P20908 AC005014.3-201ENST00000605985 190 ntBASIC2.84□□□□□ -1.95
COL5A1P20908 AL136370.1-201ENST00000608166 691 ntBASIC2.84□□□□□ -1.95
COL5A1P20908 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.84□□□□□ -1.95
COL5A1P20908 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.84□□□□□ -1.95
COL5A1P20908 RFC1-217ENST00000639695 867 ntTSL 5 BASIC2.84□□□□□ -1.95
COL5A1P20908 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
COL5A1P20908 ASNSP1-201ENST00000518311 1939 ntBASIC2.84□□□□□ -1.95
COL5A1P20908 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
COL5A1P20908 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
COL5A1P20908 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
COL5A1P20908 MTND5P23-201ENST00000430812 1655 ntBASIC2.84□□□□□ -1.95
COL5A1P20908 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
COL5A1P20908 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
COL5A1P20908 AL672167.1-206ENST00000356293 943 ntBASIC2.84□□□□□ -1.96
COL5A1P20908 NPM1P10-201ENST00000398310 865 ntBASIC2.84□□□□□ -1.96
COL5A1P20908 RNA5SP508-201ENST00000411327 119 ntBASIC2.84□□□□□ -1.96
COL5A1P20908 AC233981.1-201ENST00000423224 461 ntBASIC2.84□□□□□ -1.96
COL5A1P20908 HMGB3P8-201ENST00000449709 577 ntBASIC2.84□□□□□ -1.96
COL5A1P20908 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC2.84□□□□□ -1.96
COL5A1P20908 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.84□□□□□ -1.96
COL5A1P20908 NECAP1P2-201ENST00000455668 727 ntBASIC2.84□□□□□ -1.96
COL5A1P20908 NIPA2P2-201ENST00000496376 1083 ntBASIC2.84□□□□□ -1.96
COL5A1P20908 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
COL5A1P20908 RFPL4AP3-201ENST00000515267 345 ntBASIC2.84□□□□□ -1.96
COL5A1P20908 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.84□□□□□ -1.96
COL5A1P20908 AC087272.1-201ENST00000523624 533 ntBASIC2.84□□□□□ -1.96
COL5A1P20908 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
COL5A1P20908 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.84□□□□□ -1.96
COL5A1P20908 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.84□□□□□ -1.96
COL5A1P20908 AC009097.3-201ENST00000563557 1018 ntBASIC2.84□□□□□ -1.96
COL5A1P20908 MIR4644-201ENST00000579929 84 ntBASIC2.84□□□□□ -1.96
COL5A1P20908 AP000919.1-202ENST00000581139 1264 ntBASIC2.84□□□□□ -1.96
COL5A1P20908 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.84□□□□□ -1.96
COL5A1P20908 AC004825.2-201ENST00000616634 455 ntBASIC2.84□□□□□ -1.96
COL5A1P20908 AC091903.1-201ENST00000624322 454 ntBASIC2.84□□□□□ -1.96
COL5A1P20908 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
COL5A1P20908 IDE-202ENST00000371581 4480 ntTSL 2 BASIC2.83□□□□□ -1.96
COL5A1P20908 AL049780.3-201ENST00000624612 1583 ntBASIC2.83□□□□□ -1.96
COL5A1P20908 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC2.83□□□□□ -1.96
COL5A1P20908 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
COL5A1P20908 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
COL5A1P20908 ZNF92P1Y-201ENST00000415010 1191 ntBASIC2.83□□□□□ -1.96
COL5A1P20908 AL445528.1-201ENST00000426330 420 ntBASIC2.83□□□□□ -1.96
COL5A1P20908 AC063976.3-201ENST00000426849 329 ntBASIC2.83□□□□□ -1.96
COL5A1P20908 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.83□□□□□ -1.96
COL5A1P20908 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC2.83□□□□□ -1.96
COL5A1P20908 XKRYP6-201ENST00000440468 1116 ntBASIC2.83□□□□□ -1.96
COL5A1P20908 XKRYP3-201ENST00000442113 1116 ntBASIC2.83□□□□□ -1.96
COL5A1P20908 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.83□□□□□ -1.96
COL5A1P20908 METTL15P1-201ENST00000481421 1045 ntBASIC2.83□□□□□ -1.96
COL5A1P20908 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.83□□□□□ -1.96
COL5A1P20908 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
COL5A1P20908 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.83□□□□□ -1.96
COL5A1P20908 SNORD116-30-201ENST00000516468 85 ntBASIC2.83□□□□□ -1.96
COL5A1P20908 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC2.83□□□□□ -1.96
COL5A1P20908 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC2.83□□□□□ -1.96
COL5A1P20908 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.83□□□□□ -1.96
COL5A1P20908 ATP5F1P5-201ENST00000526403 760 ntBASIC2.83□□□□□ -1.96
COL5A1P20908 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
COL5A1P20908 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
COL5A1P20908 AC243829.7-201ENST00000633081 225 ntBASIC2.83□□□□□ -1.96
COL5A1P20908 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC2.83□□□□□ -1.96
COL5A1P20908 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
COL5A1P20908 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
COL5A1P20908 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
COL5A1P20908 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
COL5A1P20908 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
COL5A1P20908 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC2.82□□□□□ -1.96
COL5A1P20908 AC019155.1-201ENST00000382242 574 ntBASIC2.82□□□□□ -1.96
COL5A1P20908 RPL21P3-201ENST00000395517 478 ntBASIC2.82□□□□□ -1.96
COL5A1P20908 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
COL5A1P20908 RNU2-52P-201ENST00000410680 190 ntBASIC2.82□□□□□ -1.96
COL5A1P20908 RNU6-564P-201ENST00000410983 104 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms