Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
NFKB1P19838 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.86□□□□□ -1.47
NFKB1P19838 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
NFKB1P19838 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
NFKB1P19838 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
NFKB1P19838 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
NFKB1P19838 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.86□□□□□ -1.47
NFKB1P19838 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NFKB1P19838 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NFKB1P19838 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.85□□□□□ -1.47
NFKB1P19838 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
NFKB1P19838 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
NFKB1P19838 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.85□□□□□ -1.47
NFKB1P19838 SET-203ENST00000372688 801 ntTSL 2 BASIC5.85□□□□□ -1.47
NFKB1P19838 DEFB109C-201ENST00000382575 264 ntBASIC5.85□□□□□ -1.47
NFKB1P19838 DEFB109B-201ENST00000382656 264 ntBASIC5.85□□□□□ -1.47
NFKB1P19838 RNU6-641P-201ENST00000384006 107 ntBASIC5.85□□□□□ -1.47
NFKB1P19838 Y_RNA.527-201ENST00000384573 102 ntBASIC5.85□□□□□ -1.47
NFKB1P19838 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
NFKB1P19838 MIR1203-201ENST00000408812 85 ntBASIC5.85□□□□□ -1.47
NFKB1P19838 RPSAP35-201ENST00000413753 818 ntBASIC5.85□□□□□ -1.47
NFKB1P19838 BRWD1P3-201ENST00000428816 390 ntBASIC5.85□□□□□ -1.47
NFKB1P19838 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.85□□□□□ -1.47
NFKB1P19838 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.85□□□□□ -1.47
NFKB1P19838 AC005019.1-201ENST00000436455 431 ntBASIC5.85□□□□□ -1.47
NFKB1P19838 CEACAMP9-201ENST00000442990 513 ntBASIC5.85□□□□□ -1.47
NFKB1P19838 RPS26P56-201ENST00000444468 240 ntBASIC5.85□□□□□ -1.47
NFKB1P19838 AC020550.1-201ENST00000447385 163 ntBASIC5.85□□□□□ -1.47
NFKB1P19838 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC5.85□□□□□ -1.47
NFKB1P19838 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.85□□□□□ -1.47
NFKB1P19838 HLA-DPA3-207ENST00000454398 229 ntBASIC5.85□□□□□ -1.47
NFKB1P19838 RPL7P43-201ENST00000478876 753 ntBASIC5.85□□□□□ -1.47
NFKB1P19838 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.85□□□□□ -1.47
NFKB1P19838 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NFKB1P19838 HMGN1P9-201ENST00000515212 298 ntBASIC5.85□□□□□ -1.47
NFKB1P19838 RNU6-256P-201ENST00000516747 97 ntBASIC5.85□□□□□ -1.47
NFKB1P19838 AC090136.1-201ENST00000520009 240 ntBASIC5.85□□□□□ -1.47
NFKB1P19838 AC112191.2-201ENST00000522428 333 ntBASIC5.85□□□□□ -1.47
NFKB1P19838 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
NFKB1P19838 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC5.85□□□□□ -1.47
NFKB1P19838 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.85□□□□□ -1.47
NFKB1P19838 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.85□□□□□ -1.47
NFKB1P19838 MTCO3P23-201ENST00000561363 289 ntBASIC5.85□□□□□ -1.47
NFKB1P19838 AC096996.1-201ENST00000563813 325 ntBASIC5.85□□□□□ -1.47
NFKB1P19838 TVP23CP2-201ENST00000571473 623 ntBASIC5.85□□□□□ -1.47
NFKB1P19838 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.85□□□□□ -1.47
NFKB1P19838 Z82243.1-201ENST00000609432 473 ntBASIC5.85□□□□□ -1.47
NFKB1P19838 AC245517.5-201ENST00000611529 162 ntBASIC5.85□□□□□ -1.47
NFKB1P19838 AC012409.4-201ENST00000612923 249 ntBASIC5.85□□□□□ -1.47
NFKB1P19838 AL390240.1-201ENST00000612950 384 ntBASIC5.85□□□□□ -1.47
NFKB1P19838 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.85□□□□□ -1.47
NFKB1P19838 AC008013.2-202ENST00000637965 364 ntBASIC5.85□□□□□ -1.47
NFKB1P19838 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.85□□□□□ -1.47
NFKB1P19838 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
NFKB1P19838 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
NFKB1P19838 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NFKB1P19838 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.85□□□□□ -1.47
NFKB1P19838 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
NFKB1P19838 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.85□□□□□ -1.47
NFKB1P19838 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC5.85□□□□□ -1.47
NFKB1P19838 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
NFKB1P19838 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NFKB1P19838 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NFKB1P19838 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NFKB1P19838 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NFKB1P19838 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.84□□□□□ -1.47
NFKB1P19838 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.84□□□□□ -1.47
NFKB1P19838 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.84□□□□□ -1.47
NFKB1P19838 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NFKB1P19838 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NFKB1P19838 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
NFKB1P19838 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
NFKB1P19838 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.84□□□□□ -1.47
NFKB1P19838 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NFKB1P19838 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.84□□□□□ -1.47
NFKB1P19838 AC004076.2-201ENST00000620532 3323 ntBASIC5.84□□□□□ -1.47
NFKB1P19838 RNU6-601P-201ENST00000384540 107 ntBASIC5.84□□□□□ -1.47
NFKB1P19838 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.84□□□□□ -1.47
NFKB1P19838 AC115283.1-201ENST00000427353 400 ntBASIC5.84□□□□□ -1.47
NFKB1P19838 AC096644.2-201ENST00000429278 159 ntBASIC5.84□□□□□ -1.47
NFKB1P19838 NRBF2P3-201ENST00000432731 865 ntBASIC5.84□□□□□ -1.47
NFKB1P19838 UBE2V1P13-201ENST00000436983 439 ntBASIC5.84□□□□□ -1.47
NFKB1P19838 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.84□□□□□ -1.47
NFKB1P19838 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.84□□□□□ -1.47
NFKB1P19838 RPL21P89-201ENST00000444021 467 ntBASIC5.84□□□□□ -1.47
NFKB1P19838 AL161722.1-201ENST00000446972 1032 ntBASIC5.84□□□□□ -1.47
NFKB1P19838 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.84□□□□□ -1.47
NFKB1P19838 RPL12P25-201ENST00000455592 494 ntBASIC5.84□□□□□ -1.47
NFKB1P19838 AC108059.3-201ENST00000456388 214 ntBASIC5.84□□□□□ -1.47
NFKB1P19838 ACA64.1-201ENST00000459171 127 ntBASIC5.84□□□□□ -1.47
NFKB1P19838 RPL32P33-201ENST00000487023 394 ntBASIC5.84□□□□□ -1.47
NFKB1P19838 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.84□□□□□ -1.47
NFKB1P19838 AC002456.2-201ENST00000509356 380 ntBASIC5.84□□□□□ -1.47
NFKB1P19838 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.84□□□□□ -1.47
NFKB1P19838 AC060775.1-201ENST00000518241 520 ntBASIC5.84□□□□□ -1.47
NFKB1P19838 AP005902.1-201ENST00000521358 186 ntBASIC5.84□□□□□ -1.47
NFKB1P19838 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.84□□□□□ -1.47
NFKB1P19838 TRIM77BP-201ENST00000524985 1119 ntBASIC5.84□□□□□ -1.47
NFKB1P19838 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.84□□□□□ -1.47
NFKB1P19838 TOMM20P1-201ENST00000534518 427 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms