Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC097484.1-201ENST00000471148 389 ntBASIC6.06□□□□□ -1.44
ERCC3P19447 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC6.06□□□□□ -1.44
ERCC3P19447 AL139099.1-201ENST00000497398 403 ntBASIC6.06□□□□□ -1.44
ERCC3P19447 RNU6-798P-201ENST00000516912 103 ntBASIC6.06□□□□□ -1.44
ERCC3P19447 AP003385.6-201ENST00000531603 374 ntBASIC6.06□□□□□ -1.44
ERCC3P19447 AL512360.1-201ENST00000555346 234 ntBASIC6.06□□□□□ -1.44
ERCC3P19447 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.06□□□□□ -1.44
ERCC3P19447 HMGB1P33-201ENST00000563485 527 ntBASIC6.06□□□□□ -1.44
ERCC3P19447 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC6.06□□□□□ -1.44
ERCC3P19447 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.06□□□□□ -1.44
ERCC3P19447 MIR3146-201ENST00000580367 79 ntBASIC6.06□□□□□ -1.44
ERCC3P19447 ELOCP28-201ENST00000590044 317 ntBASIC6.06□□□□□ -1.44
ERCC3P19447 EIF3FP1-201ENST00000613970 806 ntBASIC6.06□□□□□ -1.44
ERCC3P19447 AC139792.3-201ENST00000623525 224 ntBASIC6.06□□□□□ -1.44
ERCC3P19447 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC6.06□□□□□ -1.44
ERCC3P19447 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ERCC3P19447 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
ERCC3P19447 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
ERCC3P19447 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ERCC3P19447 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
ERCC3P19447 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ERCC3P19447 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ERCC3P19447 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
ERCC3P19447 AL034549.2-201ENST00000618285 3373 ntBASIC6.06□□□□□ -1.44
ERCC3P19447 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
ERCC3P19447 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ERCC3P19447 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ERCC3P19447 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ERCC3P19447 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
ERCC3P19447 AL450345.1-202ENST00000605741 3881 ntBASIC6.05□□□□□ -1.44
ERCC3P19447 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
ERCC3P19447 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ERCC3P19447 RNU6-989P-201ENST00000362756 107 ntBASIC6.05□□□□□ -1.44
ERCC3P19447 U3.3-201ENST00000362986 216 ntBASIC6.05□□□□□ -1.44
ERCC3P19447 RNU6-867P-201ENST00000364956 107 ntBASIC6.05□□□□□ -1.44
ERCC3P19447 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ERCC3P19447 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ERCC3P19447 GJA6P-201ENST00000415117 1042 ntBASIC6.05□□□□□ -1.44
ERCC3P19447 MTND3P17-201ENST00000416968 344 ntBASIC6.05□□□□□ -1.44
ERCC3P19447 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.05□□□□□ -1.44
ERCC3P19447 TEX41-204ENST00000423031 491 ntTSL 4 BASIC6.05□□□□□ -1.44
ERCC3P19447 EI24P4-201ENST00000423683 1078 ntBASIC6.05□□□□□ -1.44
ERCC3P19447 AL360081.1-201ENST00000428299 555 ntBASIC6.05□□□□□ -1.44
ERCC3P19447 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC6.05□□□□□ -1.44
ERCC3P19447 LINC02210-201ENST00000444561 288 ntBASIC6.05□□□□□ -1.44
ERCC3P19447 WASF1P1-201ENST00000447560 1131 ntBASIC6.05□□□□□ -1.44
ERCC3P19447 AC132479.1-201ENST00000449160 144 ntBASIC6.05□□□□□ -1.44
ERCC3P19447 HCG17-214ENST00000453558 732 ntTSL 5 BASIC6.05□□□□□ -1.44
ERCC3P19447 RPL35P6-201ENST00000490024 372 ntBASIC6.05□□□□□ -1.44
ERCC3P19447 AC019235.1-201ENST00000503847 207 ntBASIC6.05□□□□□ -1.44
ERCC3P19447 FAM92A1P2-202ENST00000504766 877 ntBASIC6.05□□□□□ -1.44
ERCC3P19447 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC6.05□□□□□ -1.44
ERCC3P19447 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC6.05□□□□□ -1.44
ERCC3P19447 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC6.05□□□□□ -1.44
ERCC3P19447 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC6.05□□□□□ -1.44
ERCC3P19447 AC006504.3-201ENST00000586818 523 ntBASIC6.05□□□□□ -1.44
ERCC3P19447 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.05□□□□□ -1.44
ERCC3P19447 Z84480.1-201ENST00000605131 311 ntBASIC6.05□□□□□ -1.44
ERCC3P19447 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ERCC3P19447 MIR6133-201ENST00000617057 108 ntBASIC6.05□□□□□ -1.44
ERCC3P19447 AC006338.1-201ENST00000618453 749 ntBASIC6.05□□□□□ -1.44
ERCC3P19447 AC091905.4-201ENST00000623432 202 ntBASIC6.05□□□□□ -1.44
ERCC3P19447 AP000843.1-201ENST00000624880 701 ntBASIC6.05□□□□□ -1.44
ERCC3P19447 SRP54-214ENST00000630962 162 ntTSL 5 BASIC6.05□□□□□ -1.44
ERCC3P19447 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
ERCC3P19447 AC009902.3-201ENST00000606235 2172 ntBASIC6.05□□□□□ -1.44
ERCC3P19447 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ERCC3P19447 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.05□□□□□ -1.44
ERCC3P19447 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
ERCC3P19447 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.05□□□□□ -1.44
ERCC3P19447 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
ERCC3P19447 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
ERCC3P19447 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.04□□□□□ -1.44
ERCC3P19447 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ERCC3P19447 AL031595.2-201ENST00000624215 19071 ntBASIC6.04□□□□□ -1.44
ERCC3P19447 OR5J1P-201ENST00000313544 939 ntBASIC6.04□□□□□ -1.44
ERCC3P19447 RN7SKP145-201ENST00000363291 303 ntBASIC6.04□□□□□ -1.44
ERCC3P19447 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
ERCC3P19447 SNORD56.6-201ENST00000384569 71 ntBASIC6.04□□□□□ -1.44
ERCC3P19447 Y_RNA.548-201ENST00000384656 105 ntBASIC6.04□□□□□ -1.44
ERCC3P19447 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
ERCC3P19447 RNU6-821P-201ENST00000390995 107 ntBASIC6.04□□□□□ -1.44
ERCC3P19447 RNU11-4P-201ENST00000391149 133 ntBASIC6.04□□□□□ -1.44
ERCC3P19447 HMGN1P24-201ENST00000412282 298 ntBASIC6.04□□□□□ -1.44
ERCC3P19447 USP9YP27-201ENST00000418455 438 ntBASIC6.04□□□□□ -1.44
ERCC3P19447 TRIM60P10Y-201ENST00000425589 751 ntBASIC6.04□□□□□ -1.44
ERCC3P19447 TRIM60P8Y-201ENST00000436338 762 ntBASIC6.04□□□□□ -1.44
ERCC3P19447 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.04□□□□□ -1.44
ERCC3P19447 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC6.04□□□□□ -1.44
ERCC3P19447 RPS29P22-201ENST00000472363 168 ntBASIC6.04□□□□□ -1.44
ERCC3P19447 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC6.04□□□□□ -1.44
ERCC3P19447 RN7SL591P-201ENST00000496150 292 ntBASIC6.04□□□□□ -1.44
ERCC3P19447 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC6.04□□□□□ -1.44
ERCC3P19447 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC6.04□□□□□ -1.44
ERCC3P19447 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC6.04□□□□□ -1.44
ERCC3P19447 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC6.04□□□□□ -1.44
ERCC3P19447 HMGB3P26-201ENST00000560051 582 ntBASIC6.04□□□□□ -1.44
ERCC3P19447 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.04□□□□□ -1.44
ERCC3P19447 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC6.04□□□□□ -1.44
ERCC3P19447 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms