Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 SNORA51.4-201ENST00000364993 124 ntBASIC2.79□□□□□ -1.96
HMGA1P17096 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HMGA1P17096 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
HMGA1P17096 AL356057.1-202ENST00000402263 756 ntBASIC2.79□□□□□ -1.96
HMGA1P17096 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.79□□□□□ -1.96
HMGA1P17096 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.79□□□□□ -1.96
HMGA1P17096 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.79□□□□□ -1.96
HMGA1P17096 RWDD4P2-201ENST00000426392 563 ntBASIC2.79□□□□□ -1.96
HMGA1P17096 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.79□□□□□ -1.96
HMGA1P17096 DNAJC19P8-201ENST00000452887 259 ntBASIC2.79□□□□□ -1.96
HMGA1P17096 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.79□□□□□ -1.96
HMGA1P17096 RPL23AP31-201ENST00000456160 467 ntBASIC2.79□□□□□ -1.96
HMGA1P17096 RWDD4P1-201ENST00000488019 565 ntBASIC2.79□□□□□ -1.96
HMGA1P17096 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.79□□□□□ -1.96
HMGA1P17096 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
HMGA1P17096 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC2.79□□□□□ -1.96
HMGA1P17096 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.79□□□□□ -1.96
HMGA1P17096 TRAV37-201ENST00000553906 342 ntBASIC2.79□□□□□ -1.96
HMGA1P17096 AC234778.2-201ENST00000566241 354 ntBASIC2.79□□□□□ -1.96
HMGA1P17096 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.79□□□□□ -1.96
HMGA1P17096 MIR6817-201ENST00000615588 66 ntBASIC2.79□□□□□ -1.96
HMGA1P17096 AC231759.1-201ENST00000616455 597 ntBASIC2.79□□□□□ -1.96
HMGA1P17096 AC092628.2-201ENST00000622492 339 ntBASIC2.79□□□□□ -1.96
HMGA1P17096 AC024023.1-201ENST00000624530 922 ntBASIC2.79□□□□□ -1.96
HMGA1P17096 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
HMGA1P17096 AC008264.2-201ENST00000610193 3731 ntBASIC2.79□□□□□ -1.96
HMGA1P17096 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.79□□□□□ -1.96
HMGA1P17096 AC104446.1-201ENST00000613728 1321 ntBASIC2.78□□□□□ -1.96
HMGA1P17096 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
HMGA1P17096 RN7SKP44-201ENST00000363602 316 ntBASIC2.78□□□□□ -1.96
HMGA1P17096 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
HMGA1P17096 XGY1-201ENST00000381172 446 ntBASIC2.78□□□□□ -1.96
HMGA1P17096 RN7SL330P-201ENST00000469709 307 ntBASIC2.78□□□□□ -1.96
HMGA1P17096 RN7SL429P-201ENST00000479090 223 ntBASIC2.78□□□□□ -1.96
HMGA1P17096 RN7SL489P-201ENST00000486185 223 ntBASIC2.78□□□□□ -1.96
HMGA1P17096 RN7SL327P-201ENST00000488659 223 ntBASIC2.78□□□□□ -1.96
HMGA1P17096 AC068305.1-201ENST00000497406 726 ntBASIC2.78□□□□□ -1.96
HMGA1P17096 RNA5SP282-201ENST00000516355 108 ntBASIC2.78□□□□□ -1.96
HMGA1P17096 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.78□□□□□ -1.96
HMGA1P17096 AC106734.1-201ENST00000568646 663 ntBASIC2.78□□□□□ -1.96
HMGA1P17096 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.78□□□□□ -1.96
HMGA1P17096 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.78□□□□□ -1.96
HMGA1P17096 AC004832.5-201ENST00000608677 401 ntBASIC2.78□□□□□ -1.96
HMGA1P17096 RN7SL853P-201ENST00000617250 223 ntBASIC2.78□□□□□ -1.96
HMGA1P17096 AC092608.2-201ENST00000624427 218 ntBASIC2.78□□□□□ -1.96
HMGA1P17096 IGHVIII-44-202ENST00000636235 289 ntBASIC2.78□□□□□ -1.96
HMGA1P17096 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC2.78□□□□□ -1.96
HMGA1P17096 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
HMGA1P17096 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HMGA1P17096 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
HMGA1P17096 MTND5P27-201ENST00000428871 1720 ntBASIC2.78□□□□□ -1.96
HMGA1P17096 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
HMGA1P17096 ZNF90P1-201ENST00000480493 1951 ntBASIC2.78□□□□□ -1.97
HMGA1P17096 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HMGA1P17096 AC092435.3-201ENST00000565538 3654 ntBASIC2.77□□□□□ -1.97
HMGA1P17096 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC2.77□□□□□ -1.97
HMGA1P17096 AC109315.1-201ENST00000584143 1347 ntBASIC2.77□□□□□ -1.97
HMGA1P17096 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
HMGA1P17096 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
HMGA1P17096 RNU6-301P-201ENST00000384277 107 ntBASIC2.77□□□□□ -1.97
HMGA1P17096 AL139039.1-201ENST00000401900 692 ntBASIC2.77□□□□□ -1.97
HMGA1P17096 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.77□□□□□ -1.97
HMGA1P17096 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HMGA1P17096 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.77□□□□□ -1.97
HMGA1P17096 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.77□□□□□ -1.97
HMGA1P17096 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HMGA1P17096 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.77□□□□□ -1.97
HMGA1P17096 AL662791.1-201ENST00000441992 928 ntBASIC2.77□□□□□ -1.97
HMGA1P17096 RPL23AP15-201ENST00000450202 459 ntBASIC2.77□□□□□ -1.97
HMGA1P17096 AC016687.1-201ENST00000482574 353 ntBASIC2.77□□□□□ -1.97
HMGA1P17096 AC011037.1-201ENST00000483964 558 ntBASIC2.77□□□□□ -1.97
HMGA1P17096 RPL5P23-201ENST00000496040 868 ntBASIC2.77□□□□□ -1.97
HMGA1P17096 AC005351.1-201ENST00000511152 786 ntBASIC2.77□□□□□ -1.97
HMGA1P17096 RNA5SP148-201ENST00000516527 94 ntBASIC2.77□□□□□ -1.97
HMGA1P17096 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.77□□□□□ -1.97
HMGA1P17096 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.77□□□□□ -1.97
HMGA1P17096 AC009097.3-201ENST00000563557 1018 ntBASIC2.77□□□□□ -1.97
HMGA1P17096 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.77□□□□□ -1.97
HMGA1P17096 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
HMGA1P17096 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HMGA1P17096 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
HMGA1P17096 Z73965.1-201ENST00000623412 2297 ntBASIC2.77□□□□□ -1.97
HMGA1P17096 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
HMGA1P17096 SNORA67.4-201ENST00000384688 142 ntBASIC2.76□□□□□ -1.97
HMGA1P17096 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC2.76□□□□□ -1.97
HMGA1P17096 BTF3P9-201ENST00000418784 283 ntBASIC2.76□□□□□ -1.97
HMGA1P17096 YPEL5P1-201ENST00000419731 367 ntBASIC2.76□□□□□ -1.97
HMGA1P17096 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.76□□□□□ -1.97
HMGA1P17096 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.76□□□□□ -1.97
HMGA1P17096 Z93242.1-201ENST00000427102 353 ntBASIC2.76□□□□□ -1.97
HMGA1P17096 AP002884.2-201ENST00000471647 395 ntBASIC2.76□□□□□ -1.97
HMGA1P17096 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.76□□□□□ -1.97
HMGA1P17096 AC118282.1-201ENST00000506408 765 ntBASIC2.76□□□□□ -1.97
HMGA1P17096 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC2.76□□□□□ -1.97
HMGA1P17096 AC119751.1-201ENST00000513357 765 ntBASIC2.76□□□□□ -1.97
HMGA1P17096 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.76□□□□□ -1.97
HMGA1P17096 SNORA9.3-201ENST00000516383 129 ntBASIC2.76□□□□□ -1.97
HMGA1P17096 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HMGA1P17096 AC008126.1-201ENST00000549019 480 ntBASIC2.76□□□□□ -1.97
HMGA1P17096 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms