Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 AC107021.2-201ENST00000567714 2095 ntBASIC5.6□□□□□ -1.51
NID1P14543 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NID1P14543 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
NID1P14543 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.6□□□□□ -1.51
NID1P14543 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
NID1P14543 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
NID1P14543 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NID1P14543 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NID1P14543 Y_RNA.39-201ENST00000362620 98 ntBASIC5.6□□□□□ -1.51
NID1P14543 RNA5SP110-201ENST00000362638 115 ntBASIC5.6□□□□□ -1.51
NID1P14543 RNA5SP375-201ENST00000362975 119 ntBASIC5.6□□□□□ -1.51
NID1P14543 Y_RNA.106-201ENST00000363189 100 ntBASIC5.6□□□□□ -1.51
NID1P14543 RNU6-97P-201ENST00000363387 104 ntBASIC5.6□□□□□ -1.51
NID1P14543 RNU105B-201ENST00000364478 208 ntBASIC5.6□□□□□ -1.51
NID1P14543 MIR649-201ENST00000384843 97 ntBASIC5.6□□□□□ -1.51
NID1P14543 AL445529.1-201ENST00000398713 389 ntBASIC5.6□□□□□ -1.51
NID1P14543 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.6□□□□□ -1.51
NID1P14543 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.6□□□□□ -1.51
NID1P14543 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.6□□□□□ -1.51
NID1P14543 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NID1P14543 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.6□□□□□ -1.51
NID1P14543 UBE2V1P13-201ENST00000436983 439 ntBASIC5.6□□□□□ -1.51
NID1P14543 RPL21P2-201ENST00000440049 481 ntBASIC5.6□□□□□ -1.51
NID1P14543 AC104332.1-201ENST00000440471 797 ntBASIC5.6□□□□□ -1.51
NID1P14543 AL121871.1-201ENST00000443413 436 ntBASIC5.6□□□□□ -1.51
NID1P14543 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.6□□□□□ -1.51
NID1P14543 AL031584.1-201ENST00000447169 754 ntBASIC5.6□□□□□ -1.51
NID1P14543 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.6□□□□□ -1.51
NID1P14543 HMGB1P4-201ENST00000455362 567 ntBASIC5.6□□□□□ -1.51
NID1P14543 AC112492.4-201ENST00000456549 352 ntBASIC5.6□□□□□ -1.51
NID1P14543 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.6□□□□□ -1.51
NID1P14543 snoU13.8-201ENST00000458890 104 ntBASIC5.6□□□□□ -1.51
NID1P14543 RPL39P38-201ENST00000467018 153 ntBASIC5.6□□□□□ -1.51
NID1P14543 AC124945.1-201ENST00000485133 188 ntBASIC5.6□□□□□ -1.51
NID1P14543 AC114801.2-201ENST00000503825 781 ntBASIC5.6□□□□□ -1.51
NID1P14543 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.6□□□□□ -1.51
NID1P14543 HIGD1AP13-201ENST00000509878 289 ntBASIC5.6□□□□□ -1.51
NID1P14543 MTND1P19-201ENST00000511780 315 ntBASIC5.6□□□□□ -1.51
NID1P14543 RNU2-10P-201ENST00000516375 211 ntBASIC5.6□□□□□ -1.51
NID1P14543 RNU4-77P-201ENST00000516692 156 ntBASIC5.6□□□□□ -1.51
NID1P14543 IGKV3D-34-201ENST00000522638 302 ntBASIC5.6□□□□□ -1.51
NID1P14543 LSM6P2-201ENST00000552208 177 ntBASIC5.6□□□□□ -1.51
NID1P14543 HSBP1P1-201ENST00000555205 166 ntBASIC5.6□□□□□ -1.51
NID1P14543 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.6□□□□□ -1.51
NID1P14543 AC119403.2-201ENST00000590960 598 ntBASIC5.6□□□□□ -1.51
NID1P14543 AC124916.2-201ENST00000604416 224 ntBASIC5.6□□□□□ -1.51
NID1P14543 Z98751.3-201ENST00000604447 521 ntBASIC5.6□□□□□ -1.51
NID1P14543 HSPE1P14-201ENST00000605812 302 ntBASIC5.6□□□□□ -1.51
NID1P14543 AL357559.1-201ENST00000622228 274 ntBASIC5.6□□□□□ -1.51
NID1P14543 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.6□□□□□ -1.51
NID1P14543 AL606534.2-204ENST00000635008 178 ntBASIC5.6□□□□□ -1.51
NID1P14543 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
NID1P14543 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NID1P14543 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
NID1P14543 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NID1P14543 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NID1P14543 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.6□□□□□ -1.51
NID1P14543 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
NID1P14543 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
NID1P14543 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NID1P14543 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
NID1P14543 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NID1P14543 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
NID1P14543 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
NID1P14543 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
NID1P14543 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
NID1P14543 AC097714.1-201ENST00000511272 1647 ntBASIC5.59□□□□□ -1.51
NID1P14543 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.59□□□□□ -1.51
NID1P14543 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
NID1P14543 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
NID1P14543 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NID1P14543 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NID1P14543 AC009902.3-201ENST00000606235 2172 ntBASIC5.59□□□□□ -1.51
NID1P14543 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
NID1P14543 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
NID1P14543 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
NID1P14543 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
NID1P14543 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NID1P14543 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.59□□□□□ -1.51
NID1P14543 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.59□□□□□ -1.51
NID1P14543 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.59□□□□□ -1.51
NID1P14543 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.59□□□□□ -1.51
NID1P14543 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.59□□□□□ -1.51
NID1P14543 Y_RNA.473-201ENST00000384333 102 ntBASIC5.59□□□□□ -1.51
NID1P14543 Y_RNA.477-201ENST00000384352 108 ntBASIC5.59□□□□□ -1.51
NID1P14543 RPL21P1-201ENST00000399532 476 ntBASIC5.59□□□□□ -1.51
NID1P14543 MIR1252-201ENST00000408861 65 ntBASIC5.59□□□□□ -1.51
NID1P14543 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.59□□□□□ -1.51
NID1P14543 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.59□□□□□ -1.51
NID1P14543 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.59□□□□□ -1.51
NID1P14543 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.59□□□□□ -1.51
NID1P14543 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.59□□□□□ -1.51
NID1P14543 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5.59□□□□□ -1.51
NID1P14543 LAMTOR5P1-201ENST00000444290 270 ntBASIC5.59□□□□□ -1.51
NID1P14543 RPL7P51-201ENST00000490532 749 ntBASIC5.59□□□□□ -1.51
NID1P14543 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.59□□□□□ -1.51
NID1P14543 AC112191.2-201ENST00000522428 333 ntBASIC5.59□□□□□ -1.51
NID1P14543 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.59□□□□□ -1.51
NID1P14543 CYCSP28-201ENST00000534284 321 ntBASIC5.59□□□□□ -1.51
NID1P14543 HMGN2P47-201ENST00000559378 272 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms