Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.12□□□□□ -1.91
FAM228BP0C875 AC006065.5-201ENST00000623427 349 ntBASIC3.12□□□□□ -1.91
FAM228BP0C875 AC009039.2-201ENST00000624524 529 ntBASIC3.12□□□□□ -1.91
FAM228BP0C875 AC084035.1-201ENST00000634543 607 ntBASIC3.12□□□□□ -1.91
FAM228BP0C875 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
FAM228BP0C875 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
FAM228BP0C875 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.12□□□□□ -1.91
FAM228BP0C875 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
FAM228BP0C875 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.12□□□□□ -1.91
FAM228BP0C875 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
FAM228BP0C875 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
FAM228BP0C875 AC007256.1-201ENST00000392253 2765 ntBASIC3.11□□□□□ -1.91
FAM228BP0C875 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
FAM228BP0C875 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.11□□□□□ -1.91
FAM228BP0C875 RPL5P18-201ENST00000406671 891 ntBASIC3.11□□□□□ -1.91
FAM228BP0C875 RNA5SP344-201ENST00000411081 104 ntBASIC3.11□□□□□ -1.91
FAM228BP0C875 AL158156.1-201ENST00000422509 473 ntBASIC3.11□□□□□ -1.91
FAM228BP0C875 AL445528.1-201ENST00000426330 420 ntBASIC3.11□□□□□ -1.91
FAM228BP0C875 AL390023.1-201ENST00000428836 262 ntBASIC3.11□□□□□ -1.91
FAM228BP0C875 AL050321.1-201ENST00000432363 400 ntBASIC3.11□□□□□ -1.91
FAM228BP0C875 AL592437.1-201ENST00000443781 492 ntBASIC3.11□□□□□ -1.91
FAM228BP0C875 AL353898.1-201ENST00000444055 238 ntBASIC3.11□□□□□ -1.91
FAM228BP0C875 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.11□□□□□ -1.91
FAM228BP0C875 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
FAM228BP0C875 RPL7P59-201ENST00000447700 943 ntBASIC3.11□□□□□ -1.91
FAM228BP0C875 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.11□□□□□ -1.91
FAM228BP0C875 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.11□□□□□ -1.91
FAM228BP0C875 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.11□□□□□ -1.91
FAM228BP0C875 DYNLL1P6-201ENST00000503440 264 ntBASIC3.11□□□□□ -1.91
FAM228BP0C875 KATNBL1P4-201ENST00000503545 918 ntBASIC3.11□□□□□ -1.91
FAM228BP0C875 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.11□□□□□ -1.91
FAM228BP0C875 HIGD1AP18-201ENST00000520730 278 ntBASIC3.11□□□□□ -1.91
FAM228BP0C875 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.11□□□□□ -1.91
FAM228BP0C875 AP001207.1-201ENST00000524051 481 ntBASIC3.11□□□□□ -1.91
FAM228BP0C875 AC007536.1-201ENST00000533382 349 ntBASIC3.11□□□□□ -1.91
FAM228BP0C875 AC034268.2-201ENST00000571784 482 ntBASIC3.11□□□□□ -1.91
FAM228BP0C875 AC005412.1-201ENST00000580812 1049 ntBASIC3.11□□□□□ -1.91
FAM228BP0C875 MIR4444-1-201ENST00000581696 74 ntBASIC3.11□□□□□ -1.91
FAM228BP0C875 MIR4444-2-201ENST00000584390 74 ntBASIC3.11□□□□□ -1.91
FAM228BP0C875 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.11□□□□□ -1.91
FAM228BP0C875 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.11□□□□□ -1.91
FAM228BP0C875 AC084036.1-201ENST00000609190 508 ntBASIC3.11□□□□□ -1.91
FAM228BP0C875 AC090115.4-201ENST00000609970 188 ntBASIC3.11□□□□□ -1.91
FAM228BP0C875 AC092184.1-201ENST00000625042 715 ntBASIC3.11□□□□□ -1.91
FAM228BP0C875 ASNSP3-201ENST00000451989 1306 ntBASIC3.11□□□□□ -1.91
FAM228BP0C875 OR5BR1P-201ENST00000524992 1330 ntBASIC3.11□□□□□ -1.91
FAM228BP0C875 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
FAM228BP0C875 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.11□□□□□ -1.91
FAM228BP0C875 API5P2-201ENST00000397055 1498 ntBASIC3.1□□□□□ -1.91
FAM228BP0C875 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.1□□□□□ -1.91
FAM228BP0C875 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
FAM228BP0C875 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
FAM228BP0C875 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
FAM228BP0C875 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.1□□□□□ -1.91
FAM228BP0C875 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
FAM228BP0C875 RPL9P7-201ENST00000330965 580 ntBASIC3.1□□□□□ -1.91
FAM228BP0C875 RNU6-666P-201ENST00000363499 107 ntBASIC3.1□□□□□ -1.91
FAM228BP0C875 RNA5SP189-201ENST00000364920 115 ntBASIC3.1□□□□□ -1.91
FAM228BP0C875 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
FAM228BP0C875 RNU6-244P-201ENST00000391028 104 ntBASIC3.1□□□□□ -1.91
FAM228BP0C875 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.1□□□□□ -1.91
FAM228BP0C875 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.1□□□□□ -1.91
FAM228BP0C875 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.1□□□□□ -1.91
FAM228BP0C875 HSPE1P28-201ENST00000443139 211 ntBASIC3.1□□□□□ -1.91
FAM228BP0C875 RPL31P20-201ENST00000449593 360 ntBASIC3.1□□□□□ -1.91
FAM228BP0C875 RPL30P11-201ENST00000495304 339 ntBASIC3.1□□□□□ -1.91
FAM228BP0C875 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.1□□□□□ -1.91
FAM228BP0C875 TMEM248P1-201ENST00000510579 951 ntBASIC3.1□□□□□ -1.91
FAM228BP0C875 RN7SKP272-201ENST00000516988 232 ntBASIC3.1□□□□□ -1.91
FAM228BP0C875 SEC11B-201ENST00000518383 499 ntBASIC3.1□□□□□ -1.91
FAM228BP0C875 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.1□□□□□ -1.91
FAM228BP0C875 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.1□□□□□ -1.91
FAM228BP0C875 AC090425.2-201ENST00000608818 501 ntBASIC3.1□□□□□ -1.91
FAM228BP0C875 AC055764.2-201ENST00000610089 670 ntBASIC3.1□□□□□ -1.91
FAM228BP0C875 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.1□□□□□ -1.91
FAM228BP0C875 AC091953.5-201ENST00000622919 233 ntBASIC3.1□□□□□ -1.91
FAM228BP0C875 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.1□□□□□ -1.91
FAM228BP0C875 AC108206.1-201ENST00000570186 4159 ntBASIC3.1□□□□□ -1.91
FAM228BP0C875 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.09□□□□□ -1.91
FAM228BP0C875 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
FAM228BP0C875 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.09□□□□□ -1.91
FAM228BP0C875 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
FAM228BP0C875 RNA5SP295-201ENST00000362655 121 ntBASIC3.09□□□□□ -1.91
FAM228BP0C875 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
FAM228BP0C875 MIR887-201ENST00000401258 79 ntBASIC3.09□□□□□ -1.91
FAM228BP0C875 GSTA8P-201ENST00000404253 637 ntBASIC3.09□□□□□ -1.91
FAM228BP0C875 AC004022.2-201ENST00000413824 193 ntBASIC3.09□□□□□ -1.91
FAM228BP0C875 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.09□□□□□ -1.91
FAM228BP0C875 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.09□□□□□ -1.91
FAM228BP0C875 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC3.09□□□□□ -1.91
FAM228BP0C875 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.09□□□□□ -1.91
FAM228BP0C875 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.09□□□□□ -1.91
FAM228BP0C875 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.09□□□□□ -1.91
FAM228BP0C875 AC093156.1-201ENST00000440382 670 ntBASIC3.09□□□□□ -1.91
FAM228BP0C875 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.09□□□□□ -1.91
FAM228BP0C875 HMGB3P15-201ENST00000507326 574 ntBASIC3.09□□□□□ -1.91
FAM228BP0C875 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.09□□□□□ -1.91
FAM228BP0C875 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.09□□□□□ -1.91
FAM228BP0C875 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.09□□□□□ -1.91
FAM228BP0C875 AP000857.1-201ENST00000532151 543 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms