Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.27□□□□□ -1.73
RB1P06400 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
RB1P06400 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
RB1P06400 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RB1P06400 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.26□□□□□ -1.73
RB1P06400 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
RB1P06400 XIAPP3-201ENST00000312918 795 ntBASIC4.26□□□□□ -1.73
RB1P06400 SNORD116.1-201ENST00000365628 92 ntBASIC4.26□□□□□ -1.73
RB1P06400 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.26□□□□□ -1.73
RB1P06400 AL023807.1-201ENST00000407932 359 ntBASIC4.26□□□□□ -1.73
RB1P06400 SYF2P2-201ENST00000417620 583 ntBASIC4.26□□□□□ -1.73
RB1P06400 RPL31P45-201ENST00000419532 356 ntBASIC4.26□□□□□ -1.73
RB1P06400 SDCBPP2-201ENST00000424643 885 ntBASIC4.26□□□□□ -1.73
RB1P06400 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.26□□□□□ -1.73
RB1P06400 RPL23AP89-201ENST00000439324 255 ntBASIC4.26□□□□□ -1.73
RB1P06400 PTENP1-201ENST00000447117 1215 ntBASIC4.26□□□□□ -1.73
RB1P06400 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RB1P06400 PRDX3P3-201ENST00000447765 522 ntBASIC4.26□□□□□ -1.73
RB1P06400 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.26□□□□□ -1.73
RB1P06400 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.26□□□□□ -1.73
RB1P06400 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RB1P06400 MTCO3P2-201ENST00000457365 171 ntBASIC4.26□□□□□ -1.73
RB1P06400 RPL5P24-201ENST00000463742 885 ntBASIC4.26□□□□□ -1.73
RB1P06400 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.26□□□□□ -1.73
RB1P06400 RPS26P28-201ENST00000470806 348 ntBASIC4.26□□□□□ -1.73
RB1P06400 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.26□□□□□ -1.73
RB1P06400 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.26□□□□□ -1.73
RB1P06400 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.26□□□□□ -1.73
RB1P06400 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.26□□□□□ -1.73
RB1P06400 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RB1P06400 HIGD1AP3-201ENST00000515857 278 ntBASIC4.26□□□□□ -1.73
RB1P06400 SNORA74D-201ENST00000516404 141 ntBASIC4.26□□□□□ -1.73
RB1P06400 RN7SKP265-201ENST00000516448 223 ntBASIC4.26□□□□□ -1.73
RB1P06400 RNU7-143P-201ENST00000516781 65 ntBASIC4.26□□□□□ -1.73
RB1P06400 SNORA70.24-201ENST00000517233 118 ntBASIC4.26□□□□□ -1.73
RB1P06400 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.26□□□□□ -1.73
RB1P06400 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.26□□□□□ -1.73
RB1P06400 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.26□□□□□ -1.73
RB1P06400 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.26□□□□□ -1.73
RB1P06400 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.26□□□□□ -1.73
RB1P06400 YPEL5P3-201ENST00000547227 352 ntBASIC4.26□□□□□ -1.73
RB1P06400 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.26□□□□□ -1.73
RB1P06400 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.26□□□□□ -1.73
RB1P06400 LSM6P2-201ENST00000552208 177 ntBASIC4.26□□□□□ -1.73
RB1P06400 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.26□□□□□ -1.73
RB1P06400 CENPUP2-201ENST00000555897 1186 ntBASIC4.26□□□□□ -1.73
RB1P06400 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.26□□□□□ -1.73
RB1P06400 RPL23AP87-202ENST00000573039 466 ntBASIC4.26□□□□□ -1.73
RB1P06400 LLPHP1-201ENST00000603571 367 ntBASIC4.26□□□□□ -1.73
RB1P06400 AL049634.3-201ENST00000604968 457 ntBASIC4.26□□□□□ -1.73
RB1P06400 AC091167.4-201ENST00000605079 184 ntBASIC4.26□□□□□ -1.73
RB1P06400 AC091946.2-201ENST00000606105 291 ntBASIC4.26□□□□□ -1.73
RB1P06400 AC092354.2-201ENST00000607786 514 ntBASIC4.26□□□□□ -1.73
RB1P06400 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.26□□□□□ -1.73
RB1P06400 AC090246.1-201ENST00000616499 426 ntBASIC4.26□□□□□ -1.73
RB1P06400 AC013470.4-201ENST00000619978 986 ntBASIC4.26□□□□□ -1.73
RB1P06400 MIR7154-201ENST00000620673 73 ntBASIC4.26□□□□□ -1.73
RB1P06400 MIR7702-201ENST00000621931 59 ntBASIC4.26□□□□□ -1.73
RB1P06400 AC073348.1-201ENST00000623002 331 ntBASIC4.26□□□□□ -1.73
RB1P06400 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.26□□□□□ -1.73
RB1P06400 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RB1P06400 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.26□□□□□ -1.73
RB1P06400 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.26□□□□□ -1.73
RB1P06400 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RB1P06400 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
RB1P06400 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RB1P06400 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
RB1P06400 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RB1P06400 SNORD35B-201ENST00000363660 87 ntBASIC4.25□□□□□ -1.73
RB1P06400 RNU6-560P-201ENST00000364007 108 ntBASIC4.25□□□□□ -1.73
RB1P06400 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RB1P06400 MIR513B-201ENST00000385136 84 ntBASIC4.25□□□□□ -1.73
RB1P06400 RNU2-42P-201ENST00000410697 113 ntBASIC4.25□□□□□ -1.73
RB1P06400 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.25□□□□□ -1.73
RB1P06400 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.25□□□□□ -1.73
RB1P06400 Z97055.1-201ENST00000419730 712 ntBASIC4.25□□□□□ -1.73
RB1P06400 MTND2P16-201ENST00000419987 799 ntBASIC4.25□□□□□ -1.73
RB1P06400 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.25□□□□□ -1.73
RB1P06400 HMGN2P31-201ENST00000432430 273 ntBASIC4.25□□□□□ -1.73
RB1P06400 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.25□□□□□ -1.73
RB1P06400 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.25□□□□□ -1.73
RB1P06400 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RB1P06400 AC069285.2-201ENST00000440210 275 ntBASIC4.25□□□□□ -1.73
RB1P06400 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.25□□□□□ -1.73
RB1P06400 CR769776.1-201ENST00000441254 787 ntBASIC4.25□□□□□ -1.73
RB1P06400 RPL23AP16-201ENST00000441715 421 ntBASIC4.25□□□□□ -1.73
RB1P06400 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.25□□□□□ -1.73
RB1P06400 MTCO1P48-201ENST00000448024 1096 ntBASIC4.25□□□□□ -1.73
RB1P06400 RPL29P29-201ENST00000448725 423 ntBASIC4.25□□□□□ -1.73
RB1P06400 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.25□□□□□ -1.73
RB1P06400 SNRPGP5-201ENST00000456003 220 ntBASIC4.25□□□□□ -1.73
RB1P06400 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.25□□□□□ -1.73
RB1P06400 AC010469.1-201ENST00000463864 576 ntBASIC4.25□□□□□ -1.73
RB1P06400 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RB1P06400 RN7SL271P-201ENST00000487601 295 ntBASIC4.25□□□□□ -1.73
RB1P06400 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RB1P06400 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
RB1P06400 KLRA1P-201ENST00000503499 986 ntBASIC4.25□□□□□ -1.73
RB1P06400 HMGN1P11-201ENST00000508668 303 ntBASIC4.25□□□□□ -1.73
RB1P06400 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms