Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 OR1S2-201ENST00000302592 978 ntBASIC3.31□□□□□ -1.88
APOEP02649 RNA5SP189-201ENST00000364920 115 ntBASIC3.31□□□□□ -1.88
APOEP02649 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
APOEP02649 SNORA11.1-201ENST00000408133 129 ntBASIC3.31□□□□□ -1.88
APOEP02649 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.31□□□□□ -1.88
APOEP02649 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.31□□□□□ -1.88
APOEP02649 AL392003.1-201ENST00000434394 243 ntBASIC3.31□□□□□ -1.88
APOEP02649 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.31□□□□□ -1.88
APOEP02649 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.31□□□□□ -1.88
APOEP02649 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.31□□□□□ -1.88
APOEP02649 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.31□□□□□ -1.88
APOEP02649 AL157827.1-201ENST00000447622 132 ntBASIC3.31□□□□□ -1.88
APOEP02649 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
APOEP02649 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.31□□□□□ -1.88
APOEP02649 TMEM248P1-201ENST00000510579 951 ntBASIC3.31□□□□□ -1.88
APOEP02649 SNORA70.24-201ENST00000517233 118 ntBASIC3.31□□□□□ -1.88
APOEP02649 AP001207.2-201ENST00000519490 539 ntBASIC3.31□□□□□ -1.88
APOEP02649 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.31□□□□□ -1.88
APOEP02649 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
APOEP02649 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.31□□□□□ -1.88
APOEP02649 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.31□□□□□ -1.88
APOEP02649 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.31□□□□□ -1.88
APOEP02649 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.31□□□□□ -1.88
APOEP02649 MIR5004-201ENST00000579078 107 ntBASIC3.31□□□□□ -1.88
APOEP02649 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.31□□□□□ -1.88
APOEP02649 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.31□□□□□ -1.88
APOEP02649 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.31□□□□□ -1.88
APOEP02649 AL442067.2-201ENST00000614033 363 ntBASIC3.31□□□□□ -1.88
APOEP02649 MIR7973-1-201ENST00000614683 76 ntBASIC3.31□□□□□ -1.88
APOEP02649 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
APOEP02649 MIR3651-201ENST00000630427 90 ntBASIC3.31□□□□□ -1.88
APOEP02649 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
APOEP02649 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
APOEP02649 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
APOEP02649 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.31□□□□□ -1.88
APOEP02649 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
APOEP02649 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.3□□□□□ -1.88
APOEP02649 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
APOEP02649 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
APOEP02649 MIR148B-201ENST00000362252 99 ntBASIC3.3□□□□□ -1.88
APOEP02649 RNA5SP391-201ENST00000363456 119 ntBASIC3.3□□□□□ -1.88
APOEP02649 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.3□□□□□ -1.88
APOEP02649 RN7SKP123-201ENST00000410732 291 ntBASIC3.3□□□□□ -1.88
APOEP02649 RPL26P37-201ENST00000411983 438 ntBASIC3.3□□□□□ -1.88
APOEP02649 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.3□□□□□ -1.88
APOEP02649 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.3□□□□□ -1.88
APOEP02649 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.3□□□□□ -1.88
APOEP02649 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.3□□□□□ -1.88
APOEP02649 OR7L1P-201ENST00000456181 380 ntBASIC3.3□□□□□ -1.88
APOEP02649 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.3□□□□□ -1.88
APOEP02649 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.3□□□□□ -1.88
APOEP02649 RN7SL504P-201ENST00000494496 287 ntBASIC3.3□□□□□ -1.88
APOEP02649 HMGB3P15-201ENST00000507326 574 ntBASIC3.3□□□□□ -1.88
APOEP02649 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.3□□□□□ -1.88
APOEP02649 PTGES3P3-201ENST00000511479 482 ntBASIC3.3□□□□□ -1.88
APOEP02649 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.3□□□□□ -1.88
APOEP02649 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.3□□□□□ -1.88
APOEP02649 MTND4LP24-201ENST00000572277 291 ntBASIC3.3□□□□□ -1.88
APOEP02649 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.3□□□□□ -1.88
APOEP02649 AC079880.2-201ENST00000603790 1213 ntBASIC3.3□□□□□ -1.88
APOEP02649 YPEL5P2-201ENST00000605553 359 ntBASIC3.3□□□□□ -1.88
APOEP02649 AC018754.1-201ENST00000607486 925 ntBASIC3.3□□□□□ -1.88
APOEP02649 NF1P10-201ENST00000613227 742 ntBASIC3.3□□□□□ -1.88
APOEP02649 AC011472.4-201ENST00000615848 491 ntBASIC3.3□□□□□ -1.88
APOEP02649 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.3□□□□□ -1.88
APOEP02649 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
APOEP02649 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
APOEP02649 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.3□□□□□ -1.88
APOEP02649 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.3□□□□□ -1.88
APOEP02649 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.29□□□□□ -1.88
APOEP02649 API5P2-201ENST00000397055 1498 ntBASIC3.29□□□□□ -1.88
APOEP02649 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
APOEP02649 XPOTP1-201ENST00000443317 2398 ntBASIC3.29□□□□□ -1.88
APOEP02649 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
APOEP02649 GSTA12P-201ENST00000402398 508 ntBASIC3.29□□□□□ -1.88
APOEP02649 AL583834.1-201ENST00000406943 343 ntBASIC3.29□□□□□ -1.88
APOEP02649 RPL32P35-201ENST00000415214 394 ntBASIC3.29□□□□□ -1.88
APOEP02649 AL512649.1-201ENST00000428997 581 ntBASIC3.29□□□□□ -1.88
APOEP02649 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
APOEP02649 TRIM60P18-201ENST00000441518 828 ntBASIC3.29□□□□□ -1.88
APOEP02649 NPM1P49-201ENST00000448027 714 ntBASIC3.29□□□□□ -1.88
APOEP02649 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.29□□□□□ -1.88
APOEP02649 AC104308.1-201ENST00000454621 333 ntBASIC3.29□□□□□ -1.88
APOEP02649 PRDX3P4-201ENST00000470828 747 ntBASIC3.29□□□□□ -1.88
APOEP02649 AC017015.1-201ENST00000477387 286 ntBASIC3.29□□□□□ -1.88
APOEP02649 AC012181.1-201ENST00000479895 423 ntBASIC3.29□□□□□ -1.88
APOEP02649 AC026427.2-201ENST00000506228 536 ntBASIC3.29□□□□□ -1.88
APOEP02649 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
APOEP02649 RNU6-1004P-201ENST00000516584 111 ntBASIC3.29□□□□□ -1.88
APOEP02649 AC245166.1-201ENST00000521012 253 ntBASIC3.29□□□□□ -1.88
APOEP02649 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.29□□□□□ -1.88
APOEP02649 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC3.29□□□□□ -1.88
APOEP02649 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.29□□□□□ -1.88
APOEP02649 MIR548Y-201ENST00000582739 110 ntBASIC3.29□□□□□ -1.88
APOEP02649 PCNAP1-202ENST00000595299 752 ntBASIC3.29□□□□□ -1.88
APOEP02649 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.29□□□□□ -1.88
APOEP02649 RNA5SP108-201ENST00000605921 117 ntBASIC3.29□□□□□ -1.88
APOEP02649 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.29□□□□□ -1.88
APOEP02649 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.29□□□□□ -1.88
APOEP02649 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms