Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC112484.5-201ENST00000624189 228 ntBASIC2.68□□□□□ -1.98
HLA-DQA1P01909 AC073476.4-201ENST00000628409 72 ntBASIC2.68□□□□□ -1.98
HLA-DQA1P01909 AC068620.4-201ENST00000636730 1182 ntBASIC2.68□□□□□ -1.98
HLA-DQA1P01909 OR52H1-202ENST00000641796 1061 ntBASIC2.68□□□□□ -1.98
HLA-DQA1P01909 MTND5P31-201ENST00000419366 1374 ntBASIC2.68□□□□□ -1.98
HLA-DQA1P01909 MTCO1P24-201ENST00000515438 1558 ntBASIC2.68□□□□□ -1.98
HLA-DQA1P01909 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.68□□□□□ -1.98
HLA-DQA1P01909 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DQA1P01909 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DQA1P01909 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DQA1P01909 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 SPRR2C-201ENST00000290702 219 ntBASIC2.67□□□□□ -1.98
HLA-DQA1P01909 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 RNU5B-4P-201ENST00000363508 111 ntBASIC2.67□□□□□ -1.98
HLA-DQA1P01909 RNU1-85P-201ENST00000364127 164 ntBASIC2.67□□□□□ -1.98
HLA-DQA1P01909 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 AL603865.2-201ENST00000401679 213 ntBASIC2.67□□□□□ -1.98
HLA-DQA1P01909 AC069282.1-201ENST00000411911 526 ntBASIC2.67□□□□□ -1.98
HLA-DQA1P01909 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 ZNF736P2Y-201ENST00000416040 1279 ntBASIC2.67□□□□□ -1.98
HLA-DQA1P01909 SDCBPP3-201ENST00000419629 891 ntBASIC2.67□□□□□ -1.98
HLA-DQA1P01909 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 AC233981.1-201ENST00000423224 461 ntBASIC2.67□□□□□ -1.98
HLA-DQA1P01909 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 SETD6P1-201ENST00000444575 317 ntBASIC2.67□□□□□ -1.98
HLA-DQA1P01909 AC010655.1-201ENST00000449336 292 ntBASIC2.67□□□□□ -1.98
HLA-DQA1P01909 Z99714.1-201ENST00000450463 807 ntBASIC2.67□□□□□ -1.98
HLA-DQA1P01909 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 RPL5P23-201ENST00000496040 868 ntBASIC2.67□□□□□ -1.98
HLA-DQA1P01909 AC108078.3-201ENST00000502633 489 ntBASIC2.67□□□□□ -1.98
HLA-DQA1P01909 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 AC016550.1-201ENST00000505348 785 ntBASIC2.67□□□□□ -1.98
HLA-DQA1P01909 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 AC104057.1-201ENST00000515547 497 ntBASIC2.67□□□□□ -1.98
HLA-DQA1P01909 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 PARP1P2-201ENST00000556806 195 ntBASIC2.67□□□□□ -1.98
HLA-DQA1P01909 AC090079.2-201ENST00000575289 768 ntBASIC2.67□□□□□ -1.98
HLA-DQA1P01909 AC022069.1-201ENST00000582910 658 ntBASIC2.67□□□□□ -1.98
HLA-DQA1P01909 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 RPAP2P1-201ENST00000603626 1168 ntBASIC2.67□□□□□ -1.98
HLA-DQA1P01909 AC002487.1-201ENST00000604565 994 ntBASIC2.67□□□□□ -1.98
HLA-DQA1P01909 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 VN1R74P-201ENST00000613259 503 ntBASIC2.67□□□□□ -1.98
HLA-DQA1P01909 AC105227.2-201ENST00000615075 605 ntBASIC2.67□□□□□ -1.98
HLA-DQA1P01909 AC018926.1-201ENST00000616335 435 ntBASIC2.67□□□□□ -1.98
HLA-DQA1P01909 MIR4278-201ENST00000636094 69 ntBASIC2.67□□□□□ -1.98
HLA-DQA1P01909 AC006927.2-201ENST00000639256 389 ntBASIC2.67□□□□□ -1.98
HLA-DQA1P01909 AC139713.2-210ENST00000641741 992 ntBASIC2.67□□□□□ -1.98
HLA-DQA1P01909 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 CASC19-261ENST00000641853 1638 ntBASIC2.67□□□□□ -1.98
HLA-DQA1P01909 AC117529.2-201ENST00000512159 2068 ntBASIC2.67□□□□□ -1.98
HLA-DQA1P01909 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC2.67□□□□□ -1.98
HLA-DQA1P01909 AC021755.1-201ENST00000559747 1447 ntBASIC2.67□□□□□ -1.98
HLA-DQA1P01909 RLIMP1-201ENST00000339626 1680 ntBASIC2.66□□□□□ -1.98
HLA-DQA1P01909 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HLA-DQA1P01909 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
HLA-DQA1P01909 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.66□□□□□ -1.98
HLA-DQA1P01909 AC126755.2-208ENST00000327792 462 ntBASIC2.66□□□□□ -1.98
HLA-DQA1P01909 AC138969.1-213ENST00000331436 462 ntBASIC2.66□□□□□ -1.98
HLA-DQA1P01909 DYNLT3P1-201ENST00000378574 347 ntBASIC2.66□□□□□ -1.98
HLA-DQA1P01909 RNU6-549P-201ENST00000384433 107 ntBASIC2.66□□□□□ -1.98
HLA-DQA1P01909 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.66□□□□□ -1.98
HLA-DQA1P01909 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.66□□□□□ -1.98
HLA-DQA1P01909 NDUFB4P5-201ENST00000415445 361 ntBASIC2.66□□□□□ -1.98
HLA-DQA1P01909 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.66□□□□□ -1.98
HLA-DQA1P01909 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.66□□□□□ -1.98
HLA-DQA1P01909 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC2.66□□□□□ -1.98
HLA-DQA1P01909 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC2.66□□□□□ -1.98
HLA-DQA1P01909 Z74696.2-201ENST00000436514 498 ntBASIC2.66□□□□□ -1.98
HLA-DQA1P01909 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.66□□□□□ -1.98
HLA-DQA1P01909 AC091564.1-201ENST00000464563 479 ntBASIC2.66□□□□□ -1.98
HLA-DQA1P01909 AL049829.1-201ENST00000465411 156 ntBASIC2.66□□□□□ -1.98
HLA-DQA1P01909 RN7SL385P-201ENST00000468873 276 ntBASIC2.66□□□□□ -1.98
HLA-DQA1P01909 RPS3AP6-201ENST00000484430 795 ntBASIC2.66□□□□□ -1.98
HLA-DQA1P01909 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
HLA-DQA1P01909 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.66□□□□□ -1.98
HLA-DQA1P01909 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.66□□□□□ -1.98
HLA-DQA1P01909 AP001207.1-201ENST00000524051 481 ntBASIC2.66□□□□□ -1.98
HLA-DQA1P01909 AP000790.1-201ENST00000528891 737 ntBASIC2.66□□□□□ -1.98
HLA-DQA1P01909 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms