Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CLDN9O95484 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN9O95484 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN9O95484 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN9O95484 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN9O95484 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN9O95484 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN9O95484 AP002784.2-201ENST00000397300 549 ntBASIC3.37□□□□□ -1.87
CLDN9O95484 RPL21P17-201ENST00000397467 475 ntBASIC3.37□□□□□ -1.87
CLDN9O95484 EIF5P1-201ENST00000400019 1231 ntBASIC3.37□□□□□ -1.87
CLDN9O95484 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.37□□□□□ -1.87
CLDN9O95484 RN7SKP285-201ENST00000410137 318 ntBASIC3.37□□□□□ -1.87
CLDN9O95484 RNU2-37P-201ENST00000410695 177 ntBASIC3.37□□□□□ -1.87
CLDN9O95484 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN9O95484 BX664727.1-201ENST00000416024 466 ntBASIC3.37□□□□□ -1.87
CLDN9O95484 EI24P1-201ENST00000416584 867 ntBASIC3.37□□□□□ -1.87
CLDN9O95484 DBIP2-201ENST00000419076 262 ntBASIC3.37□□□□□ -1.87
CLDN9O95484 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN9O95484 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN9O95484 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.37□□□□□ -1.87
CLDN9O95484 AC114973.1-201ENST00000429057 632 ntBASIC3.37□□□□□ -1.87
CLDN9O95484 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN9O95484 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN9O95484 RPL21P112-201ENST00000434403 463 ntBASIC3.37□□□□□ -1.87
CLDN9O95484 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN9O95484 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.37□□□□□ -1.87
CLDN9O95484 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN9O95484 AL358232.1-201ENST00000448030 501 ntBASIC3.37□□□□□ -1.87
CLDN9O95484 MRPS31P2-201ENST00000451581 518 ntBASIC3.37□□□□□ -1.87
CLDN9O95484 AC007967.1-201ENST00000455422 1159 ntBASIC3.37□□□□□ -1.87
CLDN9O95484 RPL23AP62-201ENST00000463396 453 ntBASIC3.37□□□□□ -1.87
CLDN9O95484 AC004801.2-202ENST00000463559 283 ntBASIC3.37□□□□□ -1.87
CLDN9O95484 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN9O95484 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.37□□□□□ -1.87
CLDN9O95484 AC027338.1-201ENST00000514840 825 ntBASIC3.37□□□□□ -1.87
CLDN9O95484 PRELID3BP4-201ENST00000515476 571 ntBASIC3.37□□□□□ -1.87
CLDN9O95484 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.37□□□□□ -1.87
CLDN9O95484 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN9O95484 MTCYBP41-201ENST00000528913 1123 ntBASIC3.37□□□□□ -1.87
CLDN9O95484 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.37□□□□□ -1.87
CLDN9O95484 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN9O95484 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
CLDN9O95484 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.37□□□□□ -1.87
CLDN9O95484 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.37□□□□□ -1.87
CLDN9O95484 AC024220.1-201ENST00000603675 484 ntBASIC3.37□□□□□ -1.87
CLDN9O95484 MIR7851-201ENST00000610611 160 ntBASIC3.37□□□□□ -1.87
CLDN9O95484 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.37□□□□□ -1.87
CLDN9O95484 AL121772.2-201ENST00000614331 297 ntBASIC3.37□□□□□ -1.87
CLDN9O95484 AL357559.1-201ENST00000622228 274 ntBASIC3.37□□□□□ -1.87
CLDN9O95484 CR392039.5-201ENST00000623201 510 ntBASIC3.37□□□□□ -1.87
CLDN9O95484 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.37□□□□□ -1.87
CLDN9O95484 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN9O95484 USP8P1-201ENST00000494673 3183 ntBASIC3.37□□□□□ -1.87
CLDN9O95484 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN9O95484 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
CLDN9O95484 AC024341.1-201ENST00000526444 1552 ntBASIC3.37□□□□□ -1.87
CLDN9O95484 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN9O95484 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN9O95484 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
CLDN9O95484 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN9O95484 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CLDN9O95484 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN9O95484 AC058791.1-201ENST00000608412 3198 ntBASIC3.37□□□□□ -1.87
CLDN9O95484 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.36□□□□□ -1.87
CLDN9O95484 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CLDN9O95484 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLDN9O95484 AL513302.2-201ENST00000562313 1842 ntBASIC3.36□□□□□ -1.87
CLDN9O95484 MIR30E-201ENST00000362104 92 ntBASIC3.36□□□□□ -1.87
CLDN9O95484 RNU6-600P-201ENST00000362524 99 ntBASIC3.36□□□□□ -1.87
CLDN9O95484 RNA5SP387-201ENST00000364226 106 ntBASIC3.36□□□□□ -1.87
CLDN9O95484 SNORA7.2-201ENST00000364446 145 ntBASIC3.36□□□□□ -1.87
CLDN9O95484 RNU6-335P-201ENST00000364563 113 ntBASIC3.36□□□□□ -1.87
CLDN9O95484 RNU6-609P-201ENST00000365459 107 ntBASIC3.36□□□□□ -1.87
CLDN9O95484 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLDN9O95484 MIR607-201ENST00000385241 96 ntBASIC3.36□□□□□ -1.87
CLDN9O95484 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLDN9O95484 RNU6-55P-201ENST00000411092 107 ntBASIC3.36□□□□□ -1.87
CLDN9O95484 RNU6-954P-201ENST00000411355 107 ntBASIC3.36□□□□□ -1.87
CLDN9O95484 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.36□□□□□ -1.87
CLDN9O95484 AL513174.1-201ENST00000423182 629 ntBASIC3.36□□□□□ -1.87
CLDN9O95484 RPP40P1-201ENST00000426762 456 ntBASIC3.36□□□□□ -1.87
CLDN9O95484 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.36□□□□□ -1.87
CLDN9O95484 AP000907.1-201ENST00000428428 510 ntBASIC3.36□□□□□ -1.87
CLDN9O95484 GXYLT1P1-201ENST00000446657 490 ntBASIC3.36□□□□□ -1.87
CLDN9O95484 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.36□□□□□ -1.87
CLDN9O95484 RPL23AP67-201ENST00000465341 474 ntBASIC3.36□□□□□ -1.87
CLDN9O95484 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.36□□□□□ -1.87
CLDN9O95484 TMED11P-201ENST00000479478 690 ntBASIC3.36□□□□□ -1.87
CLDN9O95484 RPL23AP55-201ENST00000498163 452 ntBASIC3.36□□□□□ -1.87
CLDN9O95484 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.36□□□□□ -1.87
CLDN9O95484 AC121161.1-201ENST00000510606 652 ntBASIC3.36□□□□□ -1.87
CLDN9O95484 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.36□□□□□ -1.87
CLDN9O95484 RNU6-1231P-201ENST00000517185 103 ntBASIC3.36□□□□□ -1.87
CLDN9O95484 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.36□□□□□ -1.87
CLDN9O95484 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.36□□□□□ -1.87
CLDN9O95484 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLDN9O95484 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.36□□□□□ -1.87
CLDN9O95484 AC092470.1-201ENST00000546187 132 ntBASIC3.36□□□□□ -1.87
CLDN9O95484 NIFKP8-201ENST00000560500 874 ntBASIC3.36□□□□□ -1.87
CLDN9O95484 AC107954.1-201ENST00000565906 727 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms