Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 SAR1AP4-201ENST00000429225 591 ntBASIC2.84□□□□□ -1.95
UPK1BO75841 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.84□□□□□ -1.95
UPK1BO75841 ELOCP3-201ENST00000439303 348 ntBASIC2.84□□□□□ -1.95
UPK1BO75841 AC092170.1-201ENST00000440211 356 ntBASIC2.84□□□□□ -1.95
UPK1BO75841 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC2.84□□□□□ -1.95
UPK1BO75841 NOTCH2P1-201ENST00000443481 624 ntBASIC2.84□□□□□ -1.95
UPK1BO75841 ELOCP13-201ENST00000443934 329 ntBASIC2.84□□□□□ -1.95
UPK1BO75841 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC2.84□□□□□ -1.95
UPK1BO75841 snoU13.3-201ENST00000459441 104 ntBASIC2.84□□□□□ -1.95
UPK1BO75841 AC010285.1-201ENST00000470580 392 ntBASIC2.84□□□□□ -1.95
UPK1BO75841 AC025674.1-201ENST00000507074 324 ntBASIC2.84□□□□□ -1.95
UPK1BO75841 AC010468.3-201ENST00000508225 458 ntBASIC2.84□□□□□ -1.95
UPK1BO75841 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC2.84□□□□□ -1.95
UPK1BO75841 GMPSP1-201ENST00000514075 579 ntBASIC2.84□□□□□ -1.95
UPK1BO75841 AC104057.1-201ENST00000515547 497 ntBASIC2.84□□□□□ -1.95
UPK1BO75841 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
UPK1BO75841 SNORA76.2-201ENST00000517095 137 ntBASIC2.84□□□□□ -1.95
UPK1BO75841 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.84□□□□□ -1.95
UPK1BO75841 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.84□□□□□ -1.95
UPK1BO75841 IGJP1-201ENST00000522682 475 ntBASIC2.84□□□□□ -1.95
UPK1BO75841 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.84□□□□□ -1.95
UPK1BO75841 AC095057.3-201ENST00000567102 1157 ntBASIC2.84□□□□□ -1.95
UPK1BO75841 AC023824.3-201ENST00000569003 562 ntBASIC2.84□□□□□ -1.95
UPK1BO75841 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.84□□□□□ -1.95
UPK1BO75841 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC2.84□□□□□ -1.95
UPK1BO75841 AC015917.1-201ENST00000579654 510 ntBASIC2.84□□□□□ -1.95
UPK1BO75841 AC053481.4-201ENST00000583164 216 ntBASIC2.84□□□□□ -1.95
UPK1BO75841 VN1R88P-201ENST00000596787 292 ntBASIC2.84□□□□□ -1.95
UPK1BO75841 AC234771.5-201ENST00000600161 514 ntBASIC2.84□□□□□ -1.95
UPK1BO75841 RNU4-89P-201ENST00000607443 133 ntBASIC2.84□□□□□ -1.95
UPK1BO75841 AC012467.1-201ENST00000607740 256 ntBASIC2.84□□□□□ -1.95
UPK1BO75841 AC016542.1-201ENST00000608259 493 ntBASIC2.84□□□□□ -1.95
UPK1BO75841 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.84□□□□□ -1.95
UPK1BO75841 U4.6-201ENST00000621618 127 ntBASIC2.84□□□□□ -1.95
UPK1BO75841 PLCE1P1-201ENST00000622094 305 ntBASIC2.84□□□□□ -1.95
UPK1BO75841 AC020923.1-201ENST00000624021 917 ntBASIC2.84□□□□□ -1.95
UPK1BO75841 AC068620.4-201ENST00000636730 1182 ntBASIC2.84□□□□□ -1.95
UPK1BO75841 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.95
UPK1BO75841 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
UPK1BO75841 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
UPK1BO75841 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
UPK1BO75841 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
UPK1BO75841 RARSP1-201ENST00000542842 1418 ntBASIC2.84□□□□□ -1.96
UPK1BO75841 API5P2-201ENST00000397055 1498 ntBASIC2.84□□□□□ -1.96
UPK1BO75841 ZNF734P-201ENST00000419494 1534 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
UPK1BO75841 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
UPK1BO75841 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.83□□□□□ -1.96
UPK1BO75841 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
UPK1BO75841 AC079741.1-201ENST00000321498 212 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 RNA5SP509-201ENST00000364577 119 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 RNU6-650P-201ENST00000365658 111 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.83□□□□□ -1.96
UPK1BO75841 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC2.83□□□□□ -1.96
UPK1BO75841 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC2.83□□□□□ -1.96
UPK1BO75841 FABP12P1-201ENST00000401911 322 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 AL357075.1-201ENST00000404107 726 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 RNU4-27P-201ENST00000410889 139 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 RNU2-71P-201ENST00000411395 189 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.83□□□□□ -1.96
UPK1BO75841 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.83□□□□□ -1.96
UPK1BO75841 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.83□□□□□ -1.96
UPK1BO75841 RPS12P18-201ENST00000442381 270 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 AL929288.2-201ENST00000446368 407 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
UPK1BO75841 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC2.83□□□□□ -1.96
UPK1BO75841 snoU13.24-201ENST00000458998 104 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 AC011276.1-201ENST00000469688 323 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 RPS26P21-201ENST00000475397 348 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 RNU6-416P-201ENST00000516265 103 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 SNORA31.20-201ENST00000517111 133 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 SNORA31.26-201ENST00000517250 137 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 RPL12P22-201ENST00000519073 490 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.83□□□□□ -1.96
UPK1BO75841 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.83□□□□□ -1.96
UPK1BO75841 AC120057.2-201ENST00000571520 271 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.83□□□□□ -1.96
UPK1BO75841 AL669831.4-202ENST00000590817 238 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 AC023043.3-201ENST00000593113 385 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 ZNF92P2-201ENST00000600543 1059 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 AL020997.3-201ENST00000602843 359 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 AC005972.3-201ENST00000606304 481 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC2.83□□□□□ -1.96
UPK1BO75841 AL451074.6-201ENST00000608512 729 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 AC245100.7-201ENST00000609678 442 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 AL590282.1-201ENST00000610379 1136 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 SDR42E1P1-201ENST00000611327 477 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 AC114781.5-201ENST00000615297 108 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 MIR7155-201ENST00000615925 56 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 AC090510.2-201ENST00000617465 629 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 AC006213.5-201ENST00000619673 288 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 MIR6500-201ENST00000622700 86 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC2.83□□□□□ -1.96
UPK1BO75841 AL392088.2-201ENST00000637607 285 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC2.83□□□□□ -1.96
UPK1BO75841 AC132825.7-201ENST00000638744 335 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.83□□□□□ -1.96
UPK1BO75841 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
UPK1BO75841 FAM35BP-202ENST00000497389 3337 ntBASIC2.83□□□□□ -1.96
UPK1BO75841 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms