Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 RNU6-806P-201ENST00000365147 105 ntBASIC6.83□□□□□ -1.32
ACTN4O43707 RNU6-61P-201ENST00000365528 109 ntBASIC6.83□□□□□ -1.32
ACTN4O43707 RNU6-338P-201ENST00000383888 105 ntBASIC6.83□□□□□ -1.32
ACTN4O43707 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
ACTN4O43707 AL024474.1-201ENST00000404655 591 ntBASIC6.83□□□□□ -1.32
ACTN4O43707 GSTM3P2-201ENST00000412746 530 ntBASIC6.83□□□□□ -1.32
ACTN4O43707 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC6.83□□□□□ -1.32
ACTN4O43707 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.83□□□□□ -1.32
ACTN4O43707 RPL37P1-201ENST00000432310 284 ntBASIC6.83□□□□□ -1.32
ACTN4O43707 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.83□□□□□ -1.32
ACTN4O43707 LINC00328-2P-201ENST00000436585 219 ntBASIC6.83□□□□□ -1.32
ACTN4O43707 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.83□□□□□ -1.32
ACTN4O43707 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.83□□□□□ -1.32
ACTN4O43707 AC007967.1-201ENST00000455422 1159 ntBASIC6.83□□□□□ -1.32
ACTN4O43707 AC245028.2-201ENST00000458673 253 ntBASIC6.83□□□□□ -1.32
ACTN4O43707 RPL21P8-201ENST00000465083 535 ntBASIC6.83□□□□□ -1.32
ACTN4O43707 RN7SL352P-201ENST00000466002 277 ntBASIC6.83□□□□□ -1.32
ACTN4O43707 DYNLL1P5-201ENST00000467158 270 ntBASIC6.83□□□□□ -1.32
ACTN4O43707 AP002812.1-201ENST00000495378 474 ntBASIC6.83□□□□□ -1.32
ACTN4O43707 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.83□□□□□ -1.32
ACTN4O43707 IL7R-208ENST00000511982 612 ntTSL 2 BASIC6.83□□□□□ -1.32
ACTN4O43707 ZNF519P4-201ENST00000514008 125 ntBASIC6.83□□□□□ -1.32
ACTN4O43707 SNORA40.14-201ENST00000516543 86 ntBASIC6.83□□□□□ -1.32
ACTN4O43707 RN7SKP96-201ENST00000516948 297 ntBASIC6.83□□□□□ -1.32
ACTN4O43707 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
ACTN4O43707 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC6.83□□□□□ -1.32
ACTN4O43707 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.83□□□□□ -1.32
ACTN4O43707 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.83□□□□□ -1.32
ACTN4O43707 AC125612.1-201ENST00000547580 377 ntBASIC6.83□□□□□ -1.32
ACTN4O43707 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC6.83□□□□□ -1.32
ACTN4O43707 AC130289.1-201ENST00000577321 73 ntBASIC6.83□□□□□ -1.32
ACTN4O43707 RN7SL66P-201ENST00000582099 264 ntBASIC6.83□□□□□ -1.32
ACTN4O43707 AC006557.5-201ENST00000603126 811 ntBASIC6.83□□□□□ -1.32
ACTN4O43707 AP001823.1-201ENST00000604056 1003 ntBASIC6.83□□□□□ -1.32
ACTN4O43707 RPSAP75-201ENST00000605848 301 ntBASIC6.83□□□□□ -1.32
ACTN4O43707 U2.17-201ENST00000611454 95 ntBASIC6.83□□□□□ -1.32
ACTN4O43707 AC000123.2-201ENST00000623124 461 ntBASIC6.83□□□□□ -1.32
ACTN4O43707 AC127459.3-201ENST00000624328 466 ntBASIC6.83□□□□□ -1.32
ACTN4O43707 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.83□□□□□ -1.32
ACTN4O43707 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.83□□□□□ -1.32
ACTN4O43707 AC022325.1-201ENST00000502748 2199 ntBASIC6.83□□□□□ -1.32
ACTN4O43707 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
ACTN4O43707 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.83□□□□□ -1.32
ACTN4O43707 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
ACTN4O43707 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
ACTN4O43707 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
ACTN4O43707 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
ACTN4O43707 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
ACTN4O43707 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
ACTN4O43707 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ACTN4O43707 AC090220.1-201ENST00000593078 1699 ntBASIC6.82□□□□□ -1.32
ACTN4O43707 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.82□□□□□ -1.32
ACTN4O43707 Y_RNA.416-201ENST00000384014 113 ntBASIC6.82□□□□□ -1.32
ACTN4O43707 Y_RNA.464-201ENST00000384282 110 ntBASIC6.82□□□□□ -1.32
ACTN4O43707 Y_RNA.518-201ENST00000384552 113 ntBASIC6.82□□□□□ -1.32
ACTN4O43707 RNU6-1127P-201ENST00000384580 107 ntBASIC6.82□□□□□ -1.32
ACTN4O43707 RNU6-550P-201ENST00000391057 101 ntBASIC6.82□□□□□ -1.32
ACTN4O43707 HMGN1P24-201ENST00000412282 298 ntBASIC6.82□□□□□ -1.32
ACTN4O43707 AC011933.1-201ENST00000413334 321 ntBASIC6.82□□□□□ -1.32
ACTN4O43707 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.82□□□□□ -1.32
ACTN4O43707 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
ACTN4O43707 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.82□□□□□ -1.32
ACTN4O43707 RPL7P37-201ENST00000425095 738 ntBASIC6.82□□□□□ -1.32
ACTN4O43707 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.82□□□□□ -1.32
ACTN4O43707 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.82□□□□□ -1.32
ACTN4O43707 OR3D1P-201ENST00000438288 955 ntBASIC6.82□□□□□ -1.32
ACTN4O43707 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
ACTN4O43707 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC6.82□□□□□ -1.32
ACTN4O43707 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC6.82□□□□□ -1.32
ACTN4O43707 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC6.82□□□□□ -1.32
ACTN4O43707 MRPL57P6-201ENST00000506570 309 ntBASIC6.82□□□□□ -1.32
ACTN4O43707 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.82□□□□□ -1.32
ACTN4O43707 AC090958.1-201ENST00000511122 351 ntBASIC6.82□□□□□ -1.32
ACTN4O43707 AC108471.1-201ENST00000513977 287 ntBASIC6.82□□□□□ -1.32
ACTN4O43707 RNU6-570P-201ENST00000517051 105 ntBASIC6.82□□□□□ -1.32
ACTN4O43707 CYCSP22-201ENST00000517555 339 ntBASIC6.82□□□□□ -1.32
ACTN4O43707 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC6.82□□□□□ -1.32
ACTN4O43707 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
ACTN4O43707 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.82□□□□□ -1.32
ACTN4O43707 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.82□□□□□ -1.32
ACTN4O43707 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.82□□□□□ -1.32
ACTN4O43707 AL138693.1-201ENST00000622219 129 ntBASIC6.82□□□□□ -1.32
ACTN4O43707 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.82□□□□□ -1.32
ACTN4O43707 MIR4272-201ENST00000635924 64 ntBASIC6.82□□□□□ -1.32
ACTN4O43707 AC007603.3-201ENST00000636915 979 ntBASIC6.82□□□□□ -1.32
ACTN4O43707 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.82□□□□□ -1.32
ACTN4O43707 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
ACTN4O43707 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ACTN4O43707 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.82□□□□□ -1.32
ACTN4O43707 NXPH1-205ENST00000602349 1953 ntBASIC6.82□□□□□ -1.32
ACTN4O43707 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ACTN4O43707 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.82□□□□□ -1.32
ACTN4O43707 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
ACTN4O43707 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.81□□□□□ -1.32
ACTN4O43707 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.81□□□□□ -1.32
ACTN4O43707 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC6.81□□□□□ -1.32
ACTN4O43707 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
ACTN4O43707 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
ACTN4O43707 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
ACTN4O43707 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms