Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HOXA2O43364 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
HOXA2O43364 AC233263.6-201ENST00000631132 1963 ntBASIC6.68□□□□□ -1.34
HOXA2O43364 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HOXA2O43364 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.67□□□□□ -1.34
HOXA2O43364 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HOXA2O43364 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
HOXA2O43364 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.67□□□□□ -1.34
HOXA2O43364 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HOXA2O43364 AC022325.1-201ENST00000502748 2199 ntBASIC6.67□□□□□ -1.34
HOXA2O43364 MIR323A-201ENST00000362199 86 ntBASIC6.67□□□□□ -1.34
HOXA2O43364 RNU6-1078P-201ENST00000364522 103 ntBASIC6.67□□□□□ -1.34
HOXA2O43364 SNORD70.1-201ENST00000391007 85 ntBASIC6.67□□□□□ -1.34
HOXA2O43364 U3.25-201ENST00000391209 220 ntBASIC6.67□□□□□ -1.34
HOXA2O43364 RNU6-293P-201ENST00000411259 106 ntBASIC6.67□□□□□ -1.34
HOXA2O43364 AL035660.1-201ENST00000422041 222 ntBASIC6.67□□□□□ -1.34
HOXA2O43364 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC6.67□□□□□ -1.34
HOXA2O43364 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.67□□□□□ -1.34
HOXA2O43364 MRPS18BP2-201ENST00000434310 759 ntBASIC6.67□□□□□ -1.34
HOXA2O43364 AC005094.1-201ENST00000440420 368 ntBASIC6.67□□□□□ -1.34
HOXA2O43364 AL353752.1-201ENST00000454946 260 ntBASIC6.67□□□□□ -1.34
HOXA2O43364 AL445687.2-201ENST00000458156 728 ntBASIC6.67□□□□□ -1.34
HOXA2O43364 AC245028.2-201ENST00000458673 253 ntBASIC6.67□□□□□ -1.34
HOXA2O43364 SNORD127-201ENST00000458892 86 ntBASIC6.67□□□□□ -1.34
HOXA2O43364 RNU7-167P-201ENST00000459160 62 ntBASIC6.67□□□□□ -1.34
HOXA2O43364 RN7SL174P-201ENST00000475578 289 ntBASIC6.67□□□□□ -1.34
HOXA2O43364 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC6.67□□□□□ -1.34
HOXA2O43364 IL7R-208ENST00000511982 612 ntTSL 2 BASIC6.67□□□□□ -1.34
HOXA2O43364 RNA5SP438-201ENST00000516561 112 ntBASIC6.67□□□□□ -1.34
HOXA2O43364 RNA5SP384-201ENST00000516615 116 ntBASIC6.67□□□□□ -1.34
HOXA2O43364 AC092121.1-201ENST00000569452 202 ntBASIC6.67□□□□□ -1.34
HOXA2O43364 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC6.67□□□□□ -1.34
HOXA2O43364 RN7SL802P-201ENST00000577858 299 ntBASIC6.67□□□□□ -1.34
HOXA2O43364 MIR3128-201ENST00000581957 66 ntBASIC6.67□□□□□ -1.34
HOXA2O43364 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.67□□□□□ -1.34
HOXA2O43364 AC011494.1-201ENST00000596454 237 ntBASIC6.67□□□□□ -1.34
HOXA2O43364 IGHV3-29-201ENST00000604817 344 ntBASIC6.67□□□□□ -1.34
HOXA2O43364 AL512329.2-201ENST00000607350 548 ntBASIC6.67□□□□□ -1.34
HOXA2O43364 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.67□□□□□ -1.34
HOXA2O43364 U6.104-201ENST00000637979 90 ntBASIC6.67□□□□□ -1.34
HOXA2O43364 AP002370.1-201ENST00000528055 1602 ntBASIC6.67□□□□□ -1.34
HOXA2O43364 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HOXA2O43364 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC6.67□□□□□ -1.34
HOXA2O43364 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC6.67□□□□□ -1.34
HOXA2O43364 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
HOXA2O43364 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
HOXA2O43364 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HOXA2O43364 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HOXA2O43364 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HOXA2O43364 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HOXA2O43364 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HOXA2O43364 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HOXA2O43364 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
HOXA2O43364 BX322650.1-201ENST00000332359 2143 ntBASIC6.67□□□□□ -1.34
HOXA2O43364 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HOXA2O43364 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
HOXA2O43364 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
HOXA2O43364 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HOXA2O43364 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.66□□□□□ -1.34
HOXA2O43364 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HOXA2O43364 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.66□□□□□ -1.34
HOXA2O43364 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.66□□□□□ -1.34
HOXA2O43364 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.66□□□□□ -1.34
HOXA2O43364 AL731566.1-201ENST00000620490 1937 ntBASIC6.66□□□□□ -1.34
HOXA2O43364 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.66□□□□□ -1.34
HOXA2O43364 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
HOXA2O43364 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
HOXA2O43364 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
HOXA2O43364 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HOXA2O43364 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HOXA2O43364 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HOXA2O43364 XIAPP3-201ENST00000312918 795 ntBASIC6.66□□□□□ -1.34
HOXA2O43364 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
HOXA2O43364 SNORD62.1-201ENST00000362541 86 ntBASIC6.66□□□□□ -1.34
HOXA2O43364 RNU1-130P-201ENST00000363930 160 ntBASIC6.66□□□□□ -1.34
HOXA2O43364 SNORA20.1-201ENST00000364790 130 ntBASIC6.66□□□□□ -1.34
HOXA2O43364 SNORA43.1-201ENST00000364863 140 ntBASIC6.66□□□□□ -1.34
HOXA2O43364 MIR640-201ENST00000385086 96 ntBASIC6.66□□□□□ -1.34
HOXA2O43364 RNU6-55P-201ENST00000411092 107 ntBASIC6.66□□□□□ -1.34
HOXA2O43364 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.66□□□□□ -1.34
HOXA2O43364 AC243428.1-201ENST00000421099 264 ntBASIC6.66□□□□□ -1.34
HOXA2O43364 RPL21P109-201ENST00000422213 475 ntBASIC6.66□□□□□ -1.34
HOXA2O43364 CHEK2P5-201ENST00000423877 246 ntBASIC6.66□□□□□ -1.34
HOXA2O43364 RPL21P2-201ENST00000440049 481 ntBASIC6.66□□□□□ -1.34
HOXA2O43364 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC6.66□□□□□ -1.34
HOXA2O43364 AL353691.1-201ENST00000451332 387 ntBASIC6.66□□□□□ -1.34
HOXA2O43364 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC6.66□□□□□ -1.34
HOXA2O43364 AC104164.1-201ENST00000460282 590 ntBASIC6.66□□□□□ -1.34
HOXA2O43364 COX7A2P2-201ENST00000505291 250 ntBASIC6.66□□□□□ -1.34
HOXA2O43364 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.66□□□□□ -1.34
HOXA2O43364 RNU6-1023P-201ENST00000516137 106 ntBASIC6.66□□□□□ -1.34
HOXA2O43364 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.66□□□□□ -1.34
HOXA2O43364 RNU6-323P-201ENST00000521915 107 ntBASIC6.66□□□□□ -1.34
HOXA2O43364 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.66□□□□□ -1.34
HOXA2O43364 RRN3P3-201ENST00000549207 578 ntBASIC6.66□□□□□ -1.34
HOXA2O43364 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC6.66□□□□□ -1.34
HOXA2O43364 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.66□□□□□ -1.34
HOXA2O43364 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.66□□□□□ -1.34
HOXA2O43364 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC6.66□□□□□ -1.34
HOXA2O43364 AC008555.7-201ENST00000605008 583 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms