Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 MTCYBP20-201ENST00000524239 1129 ntBASIC4.61□□□□□ -1.67
PHGDHO43175 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.61□□□□□ -1.67
PHGDHO43175 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.61□□□□□ -1.67
PHGDHO43175 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.61□□□□□ -1.67
PHGDHO43175 AP001880.2-201ENST00000538233 448 ntBASIC4.61□□□□□ -1.67
PHGDHO43175 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.61□□□□□ -1.67
PHGDHO43175 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.61□□□□□ -1.67
PHGDHO43175 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.61□□□□□ -1.67
PHGDHO43175 HMGN2P6-201ENST00000551091 273 ntBASIC4.61□□□□□ -1.67
PHGDHO43175 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.61□□□□□ -1.67
PHGDHO43175 AC090615.1-201ENST00000577519 154 ntBASIC4.61□□□□□ -1.67
PHGDHO43175 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.61□□□□□ -1.67
PHGDHO43175 AL353997.4-201ENST00000586196 166 ntBASIC4.61□□□□□ -1.67
PHGDHO43175 AC087683.1-201ENST00000591187 441 ntBASIC4.61□□□□□ -1.67
PHGDHO43175 SEPT7P9-203ENST00000604116 343 ntBASIC4.61□□□□□ -1.67
PHGDHO43175 AC115621.1-201ENST00000604653 858 ntBASIC4.61□□□□□ -1.67
PHGDHO43175 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.61□□□□□ -1.67
PHGDHO43175 AC211433.2-201ENST00000608433 387 ntBASIC4.61□□□□□ -1.67
PHGDHO43175 AC009704.2-201ENST00000618739 483 ntBASIC4.61□□□□□ -1.67
PHGDHO43175 AC140113.4-201ENST00000622087 222 ntBASIC4.61□□□□□ -1.67
PHGDHO43175 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.61□□□□□ -1.67
PHGDHO43175 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.61□□□□□ -1.67
PHGDHO43175 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
PHGDHO43175 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.61□□□□□ -1.67
PHGDHO43175 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
PHGDHO43175 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.61□□□□□ -1.67
PHGDHO43175 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
PHGDHO43175 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PHGDHO43175 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
PHGDHO43175 TEX21P-201ENST00000447107 1476 ntBASIC4.61□□□□□ -1.67
PHGDHO43175 AC091046.3-201ENST00000631455 1574 ntBASIC4.61□□□□□ -1.67
PHGDHO43175 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.61□□□□□ -1.67
PHGDHO43175 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PHGDHO43175 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PHGDHO43175 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PHGDHO43175 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.6□□□□□ -1.67
PHGDHO43175 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.6□□□□□ -1.67
PHGDHO43175 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PHGDHO43175 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PHGDHO43175 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PHGDHO43175 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PHGDHO43175 RNU6-853P-201ENST00000364306 107 ntBASIC4.6□□□□□ -1.67
PHGDHO43175 Y_RNA.505-201ENST00000384489 102 ntBASIC4.6□□□□□ -1.67
PHGDHO43175 U3.29-201ENST00000391296 212 ntBASIC4.6□□□□□ -1.67
PHGDHO43175 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.6□□□□□ -1.67
PHGDHO43175 AL356421.1-201ENST00000403255 413 ntBASIC4.6□□□□□ -1.67
PHGDHO43175 SPTLC1P2-201ENST00000407089 121 ntBASIC4.6□□□□□ -1.67
PHGDHO43175 HMGN1P14-201ENST00000412459 517 ntBASIC4.6□□□□□ -1.67
PHGDHO43175 AC005517.2-201ENST00000424673 553 ntBASIC4.6□□□□□ -1.67
PHGDHO43175 VN1R54P-201ENST00000435210 1049 ntBASIC4.6□□□□□ -1.67
PHGDHO43175 RPS24P1-201ENST00000438550 371 ntBASIC4.6□□□□□ -1.67
PHGDHO43175 AC092641.1-201ENST00000440229 772 ntBASIC4.6□□□□□ -1.67
PHGDHO43175 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.6□□□□□ -1.67
PHGDHO43175 RPL29P29-201ENST00000448725 423 ntBASIC4.6□□□□□ -1.67
PHGDHO43175 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.6□□□□□ -1.67
PHGDHO43175 AL590365.1-201ENST00000450788 243 ntBASIC4.6□□□□□ -1.67
PHGDHO43175 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.6□□□□□ -1.67
PHGDHO43175 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PHGDHO43175 OR9M1P-201ENST00000459641 921 ntBASIC4.6□□□□□ -1.67
PHGDHO43175 AC034222.1-201ENST00000494052 532 ntBASIC4.6□□□□□ -1.67
PHGDHO43175 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.6□□□□□ -1.67
PHGDHO43175 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.6□□□□□ -1.67
PHGDHO43175 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
PHGDHO43175 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.6□□□□□ -1.67
PHGDHO43175 AC113430.1-201ENST00000506872 718 ntBASIC4.6□□□□□ -1.67
PHGDHO43175 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
PHGDHO43175 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.6□□□□□ -1.67
PHGDHO43175 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.6□□□□□ -1.67
PHGDHO43175 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PHGDHO43175 ATP5J2P6-201ENST00000565203 266 ntBASIC4.6□□□□□ -1.67
PHGDHO43175 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.6□□□□□ -1.67
PHGDHO43175 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.6□□□□□ -1.67
PHGDHO43175 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.6□□□□□ -1.67
PHGDHO43175 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.6□□□□□ -1.67
PHGDHO43175 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.6□□□□□ -1.67
PHGDHO43175 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.6□□□□□ -1.67
PHGDHO43175 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.6□□□□□ -1.67
PHGDHO43175 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.6□□□□□ -1.67
PHGDHO43175 AC068790.6-201ENST00000602558 258 ntBASIC4.6□□□□□ -1.67
PHGDHO43175 AC091965.4-201ENST00000607691 587 ntBASIC4.6□□□□□ -1.67
PHGDHO43175 AC099842.1-201ENST00000619919 596 ntBASIC4.6□□□□□ -1.67
PHGDHO43175 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.6□□□□□ -1.67
PHGDHO43175 AP006248.2-201ENST00000623309 592 ntBASIC4.6□□□□□ -1.67
PHGDHO43175 MIR6715B-201ENST00000637172 77 ntBASIC4.6□□□□□ -1.67
PHGDHO43175 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.6□□□□□ -1.67
PHGDHO43175 MTND4P5-201ENST00000435821 1374 ntBASIC4.6□□□□□ -1.67
PHGDHO43175 AP002001.2-201ENST00000529025 1469 ntBASIC4.6□□□□□ -1.67
PHGDHO43175 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.6□□□□□ -1.67
PHGDHO43175 AL049780.3-201ENST00000624612 1583 ntBASIC4.6□□□□□ -1.67
PHGDHO43175 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PHGDHO43175 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PHGDHO43175 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.6□□□□□ -1.67
PHGDHO43175 ZFRP1-201ENST00000457579 2970 ntBASIC4.59□□□□□ -1.67
PHGDHO43175 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PHGDHO43175 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PHGDHO43175 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
PHGDHO43175 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
PHGDHO43175 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
PHGDHO43175 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PHGDHO43175 RNU6-761P-201ENST00000384148 107 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms