Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
FOXN3O00409 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
FOXN3O00409 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
FOXN3O00409 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.72□□□□□ -1.65
FOXN3O00409 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
FOXN3O00409 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
FOXN3O00409 AC067945.1-201ENST00000342609 618 ntBASIC4.72□□□□□ -1.65
FOXN3O00409 RNU6-462P-201ENST00000362659 105 ntBASIC4.72□□□□□ -1.65
FOXN3O00409 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
FOXN3O00409 MIR3065-201ENST00000390137 79 ntBASIC4.72□□□□□ -1.65
FOXN3O00409 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.72□□□□□ -1.65
FOXN3O00409 UBTFL3-201ENST00000418934 1024 ntBASIC4.72□□□□□ -1.65
FOXN3O00409 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.72□□□□□ -1.65
FOXN3O00409 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.72□□□□□ -1.65
FOXN3O00409 FTH1P6-201ENST00000430768 320 ntBASIC4.72□□□□□ -1.65
FOXN3O00409 CKS1BP5-201ENST00000434172 273 ntBASIC4.72□□□□□ -1.65
FOXN3O00409 AC096638.2-201ENST00000434965 711 ntBASIC4.72□□□□□ -1.65
FOXN3O00409 SNRPEP7-201ENST00000438350 220 ntBASIC4.72□□□□□ -1.65
FOXN3O00409 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.72□□□□□ -1.65
FOXN3O00409 ARL2BPP10-201ENST00000446487 531 ntBASIC4.72□□□□□ -1.65
FOXN3O00409 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.72□□□□□ -1.65
FOXN3O00409 RPL21P126-201ENST00000470049 478 ntBASIC4.72□□□□□ -1.65
FOXN3O00409 SETP11-201ENST00000473027 690 ntBASIC4.72□□□□□ -1.65
FOXN3O00409 UBTFL6-201ENST00000477929 1024 ntBASIC4.72□□□□□ -1.65
FOXN3O00409 RAP1BP2-201ENST00000478270 544 ntBASIC4.72□□□□□ -1.65
FOXN3O00409 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.72□□□□□ -1.65
FOXN3O00409 AC090453.1-201ENST00000495560 436 ntBASIC4.72□□□□□ -1.65
FOXN3O00409 AC080014.1-201ENST00000496877 1201 ntBASIC4.72□□□□□ -1.65
FOXN3O00409 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.72□□□□□ -1.65
FOXN3O00409 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.72□□□□□ -1.65
FOXN3O00409 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.72□□□□□ -1.65
FOXN3O00409 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.72□□□□□ -1.65
FOXN3O00409 AC008694.2-201ENST00000517591 306 ntBASIC4.72□□□□□ -1.65
FOXN3O00409 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.72□□□□□ -1.65
FOXN3O00409 AC106038.2-201ENST00000520706 568 ntBASIC4.72□□□□□ -1.65
FOXN3O00409 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.72□□□□□ -1.65
FOXN3O00409 AC135001.1-201ENST00000544546 283 ntBASIC4.72□□□□□ -1.65
FOXN3O00409 AC084824.1-201ENST00000550917 1005 ntBASIC4.72□□□□□ -1.65
FOXN3O00409 ACTR3BP3-201ENST00000565577 979 ntBASIC4.72□□□□□ -1.65
FOXN3O00409 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.72□□□□□ -1.65
FOXN3O00409 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.72□□□□□ -1.65
FOXN3O00409 AC106028.5-201ENST00000610332 395 ntBASIC4.72□□□□□ -1.65
FOXN3O00409 AC004825.2-201ENST00000616634 455 ntBASIC4.72□□□□□ -1.65
FOXN3O00409 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
FOXN3O00409 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.72□□□□□ -1.65
FOXN3O00409 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
FOXN3O00409 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
FOXN3O00409 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
FOXN3O00409 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
FOXN3O00409 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
FOXN3O00409 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.72□□□□□ -1.65
FOXN3O00409 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.72□□□□□ -1.65
FOXN3O00409 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
FOXN3O00409 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.65
FOXN3O00409 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
FOXN3O00409 MFSD8-216ENST00000641147 4009 ntBASIC4.71□□□□□ -1.66
FOXN3O00409 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
FOXN3O00409 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
FOXN3O00409 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
FOXN3O00409 RNA5SP502-201ENST00000362694 119 ntBASIC4.71□□□□□ -1.66
FOXN3O00409 Y_RNA.493-201ENST00000384422 102 ntBASIC4.71□□□□□ -1.66
FOXN3O00409 SNORA70E-201ENST00000384492 135 ntBASIC4.71□□□□□ -1.66
FOXN3O00409 RNU6-952P-201ENST00000391164 108 ntBASIC4.71□□□□□ -1.66
FOXN3O00409 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.71□□□□□ -1.66
FOXN3O00409 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.71□□□□□ -1.66
FOXN3O00409 RPL23AP39-201ENST00000415533 405 ntBASIC4.71□□□□□ -1.66
FOXN3O00409 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.71□□□□□ -1.66
FOXN3O00409 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.71□□□□□ -1.66
FOXN3O00409 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.71□□□□□ -1.66
FOXN3O00409 RPS12P23-201ENST00000419579 400 ntBASIC4.71□□□□□ -1.66
FOXN3O00409 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.71□□□□□ -1.66
FOXN3O00409 AC098826.1-201ENST00000433943 471 ntBASIC4.71□□□□□ -1.66
FOXN3O00409 MTCO2P16-201ENST00000436962 677 ntBASIC4.71□□□□□ -1.66
FOXN3O00409 LSM1P1-201ENST00000438629 273 ntBASIC4.71□□□□□ -1.66
FOXN3O00409 AC114495.1-201ENST00000441274 436 ntBASIC4.71□□□□□ -1.66
FOXN3O00409 AP000936.2-201ENST00000447151 681 ntBASIC4.71□□□□□ -1.66
FOXN3O00409 PAXBP1P1-201ENST00000449315 447 ntBASIC4.71□□□□□ -1.66
FOXN3O00409 MTND1P27-201ENST00000451117 902 ntBASIC4.71□□□□□ -1.66
FOXN3O00409 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.71□□□□□ -1.66
FOXN3O00409 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.71□□□□□ -1.66
FOXN3O00409 AC073387.1-201ENST00000453261 709 ntBASIC4.71□□□□□ -1.66
FOXN3O00409 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.71□□□□□ -1.66
FOXN3O00409 MTND2P28-201ENST00000457540 1044 ntBASIC4.71□□□□□ -1.66
FOXN3O00409 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.71□□□□□ -1.66
FOXN3O00409 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.71□□□□□ -1.66
FOXN3O00409 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.71□□□□□ -1.66
FOXN3O00409 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
FOXN3O00409 RPL23AP72-201ENST00000492447 435 ntBASIC4.71□□□□□ -1.66
FOXN3O00409 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.71□□□□□ -1.66
FOXN3O00409 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.71□□□□□ -1.66
FOXN3O00409 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.71□□□□□ -1.66
FOXN3O00409 MTCO3P44-201ENST00000510977 541 ntBASIC4.71□□□□□ -1.66
FOXN3O00409 RNA5SP216-201ENST00000516111 123 ntBASIC4.71□□□□□ -1.66
FOXN3O00409 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
FOXN3O00409 AC087276.1-201ENST00000529659 480 ntBASIC4.71□□□□□ -1.66
FOXN3O00409 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.71□□□□□ -1.66
FOXN3O00409 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.71□□□□□ -1.66
FOXN3O00409 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.71□□□□□ -1.66
FOXN3O00409 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
FOXN3O00409 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms