Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 EI24P2-201ENST00000397776 1076 ntBASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 AL583834.1-201ENST00000406943 343 ntBASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 RNA5SP229-201ENST00000410809 99 ntBASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 AC096533.1-201ENST00000411645 353 ntBASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 TATDN1P1-201ENST00000414123 891 ntBASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 RPL32P35-201ENST00000415214 394 ntBASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 HSFY1P1-201ENST00000423928 1178 ntBASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 AL445584.1-201ENST00000431451 330 ntBASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 AC000041.1-201ENST00000439655 175 ntBASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 AL645638.1-201ENST00000440519 361 ntBASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 Z95327.1-201ENST00000446082 482 ntBASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 SETP6-201ENST00000479329 568 ntBASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 AC110760.3-202ENST00000515177 371 ntBASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 IGKV2-23-201ENST00000518729 323 ntBASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 AC008507.2-201ENST00000588402 1176 ntBASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 AC069431.2-201ENST00000604149 1099 ntBASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 AC099785.1-201ENST00000605697 437 ntBASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 AC055764.2-201ENST00000610089 670 ntBASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 AC005156.1-201ENST00000613371 573 ntBASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.28□□□□□ -1.89
TRIM49D1C9J1S8 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.89
TRIM49D1C9J1S8 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 SNORD6-201ENST00000365444 73 ntBASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 AL359837.1-201ENST00000381357 287 ntBASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 RNU6-468P-201ENST00000384003 109 ntBASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 RNU6-185P-201ENST00000384421 107 ntBASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 RNU6-328P-201ENST00000390887 106 ntBASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 SNORA48.7-201ENST00000391302 135 ntBASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 MTATP6P31-201ENST00000406985 692 ntBASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 AC007389.2-201ENST00000434630 306 ntBASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 RPS7P2-201ENST00000435134 607 ntBASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 HMGB1P45-201ENST00000435986 653 ntBASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 MTCYBP12-201ENST00000440559 1134 ntBASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 ATP5C1P1-201ENST00000441945 895 ntBASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 AC044797.1-201ENST00000445744 679 ntBASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 AL096803.2-201ENST00000450032 677 ntBASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 AL009048.1-201ENST00000450437 298 ntBASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 HMGB1P26-201ENST00000452520 628 ntBASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 RBMY2UP-201ENST00000453474 324 ntBASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 AC008379.1-201ENST00000463655 464 ntBASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 AC091564.1-201ENST00000464563 479 ntBASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 APOOP4-201ENST00000513530 597 ntBASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 HMGB1P23-201ENST00000518743 568 ntBASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 MIR548Y-201ENST00000582739 110 ntBASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 MIR4760-201ENST00000585040 80 ntBASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 AC103710.3-201ENST00000608157 948 ntBASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 AL355816.2-201ENST00000610049 647 ntBASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 AL050303.3-201ENST00000613704 284 ntBASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 AL121772.2-201ENST00000614331 297 ntBASIC3.27□□□□□ -1.89
TRIM49D1C9J1S8 AC126544.2-201ENST00000625174 749 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms