Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 FHP1-201ENST00000442741 703 ntBASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 GNL2P1-201ENST00000451274 2190 ntBASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 VPS25P1-201ENST00000455691 508 ntBASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 AC005008.1-201ENST00000456151 612 ntBASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 AC098847.1-201ENST00000473094 348 ntBASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 RN7SL214P-201ENST00000487317 265 ntBASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 MTND6P8-201ENST00000503471 522 ntBASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 RNY3P15-201ENST00000516297 97 ntBASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 RNU6-1069P-201ENST00000516612 133 ntBASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 AC007448.1-201ENST00000582714 234 ntBASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 AC008521.1-201ENST00000587471 187 ntBASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 AC008521.2-201ENST00000591021 259 ntBASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 AL512605.2-201ENST00000592972 256 ntBASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 AC024255.1-201ENST00000614376 102 ntBASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 SNX18P12-201ENST00000624821 759 ntBASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 MPP6-209ENST00000625307 126 ntTSL 5 BASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 OSBPL9P4-201ENST00000371707 1800 ntBASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 AC008627.1-201ENST00000517511 1704 ntBASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 Y_RNA.399-201ENST00000383955 105 ntBASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 RPLP0P7-201ENST00000416050 667 ntBASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 AL356968.1-201ENST00000416622 474 ntBASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 PNKDP1-201ENST00000435914 430 ntBASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 HIGD1AP11-201ENST00000438361 280 ntBASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 CYCSP24-201ENST00000445119 316 ntBASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 RPL23AP60-201ENST00000450011 454 ntBASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 AC010733.1-201ENST00000451515 401 ntBASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 PCNPP5-201ENST00000452246 481 ntBASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 AC104472.2-201ENST00000469035 601 ntBASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 AC022034.3-201ENST00000471393 478 ntBASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 RPL23AP55-201ENST00000498163 452 ntBASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 TBCAP3-201ENST00000512475 312 ntBASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 RNU6-475P-201ENST00000516073 104 ntBASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 SCARNA21.2-201ENST00000516600 166 ntBASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 CYCSP38-201ENST00000559840 322 ntBASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 AC145423.1-201ENST00000605712 336 ntBASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 AC078938.1-201ENST00000620993 318 ntBASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 AC027575.3-201ENST00000583058 2747 ntBASIC6.11□□□□□ -1.43
PCDHB11Q9Y5F2 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.1□□□□□ -1.43
PCDHB11Q9Y5F2 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHB11Q9Y5F2 MTCO1P24-201ENST00000515438 1558 ntBASIC6.1□□□□□ -1.43
PCDHB11Q9Y5F2 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
PCDHB11Q9Y5F2 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHB11Q9Y5F2 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHB11Q9Y5F2 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHB11Q9Y5F2 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.1□□□□□ -1.43
PCDHB11Q9Y5F2 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHB11Q9Y5F2 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHB11Q9Y5F2 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHB11Q9Y5F2 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.1□□□□□ -1.43
PCDHB11Q9Y5F2 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
PCDHB11Q9Y5F2 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHB11Q9Y5F2 RNU6-209P-201ENST00000384118 107 ntBASIC6.1□□□□□ -1.43
PCDHB11Q9Y5F2 Y_RNA.552-201ENST00000384665 112 ntBASIC6.1□□□□□ -1.43
PCDHB11Q9Y5F2 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDHB11Q9Y5F2 AL445189.1-201ENST00000405722 338 ntBASIC6.1□□□□□ -1.43
PCDHB11Q9Y5F2 RN7SKP206-201ENST00000410823 293 ntBASIC6.1□□□□□ -1.43
PCDHB11Q9Y5F2 AL590632.1-201ENST00000424289 371 ntBASIC6.1□□□□□ -1.43
PCDHB11Q9Y5F2 AC093106.2-201ENST00000428212 385 ntBASIC6.1□□□□□ -1.43
PCDHB11Q9Y5F2 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.1□□□□□ -1.43
PCDHB11Q9Y5F2 RPL35AP22-201ENST00000436855 335 ntBASIC6.1□□□□□ -1.43
PCDHB11Q9Y5F2 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms