Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC092013.1-201ENST00000438795 332 ntBASIC6.87□□□□□ -1.31
ZC3H4Q9UPT8 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC6.87□□□□□ -1.31
ZC3H4Q9UPT8 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ZC3H4Q9UPT8 RPS29P15-201ENST00000458329 171 ntBASIC6.87□□□□□ -1.31
ZC3H4Q9UPT8 RN7SL481P-201ENST00000477764 299 ntBASIC6.87□□□□□ -1.31
ZC3H4Q9UPT8 AL135752.1-201ENST00000479477 471 ntBASIC6.87□□□□□ -1.31
ZC3H4Q9UPT8 AK3P4-201ENST00000504283 583 ntBASIC6.87□□□□□ -1.31
ZC3H4Q9UPT8 RPL39P5-202ENST00000512505 151 ntBASIC6.87□□□□□ -1.31
ZC3H4Q9UPT8 RN7SKP96-201ENST00000516948 297 ntBASIC6.87□□□□□ -1.31
ZC3H4Q9UPT8 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.87□□□□□ -1.31
ZC3H4Q9UPT8 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6.87□□□□□ -1.31
ZC3H4Q9UPT8 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.87□□□□□ -1.31
ZC3H4Q9UPT8 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC6.87□□□□□ -1.31
ZC3H4Q9UPT8 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ZC3H4Q9UPT8 LSM6P2-201ENST00000552208 177 ntBASIC6.87□□□□□ -1.31
ZC3H4Q9UPT8 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC6.87□□□□□ -1.31
ZC3H4Q9UPT8 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.87□□□□□ -1.31
ZC3H4Q9UPT8 AC068790.3-201ENST00000602988 553 ntBASIC6.87□□□□□ -1.31
ZC3H4Q9UPT8 RMST_9.1-201ENST00000619945 193 ntBASIC6.87□□□□□ -1.31
ZC3H4Q9UPT8 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC6.87□□□□□ -1.31
ZC3H4Q9UPT8 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ZC3H4Q9UPT8 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ZC3H4Q9UPT8 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.87□□□□□ -1.31
ZC3H4Q9UPT8 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ZC3H4Q9UPT8 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
ZC3H4Q9UPT8 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ZC3H4Q9UPT8 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ZC3H4Q9UPT8 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ZC3H4Q9UPT8 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 AL592114.1-201ENST00000403842 483 ntBASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 DUTP5-201ENST00000406790 469 ntBASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 RN7SKP235-201ENST00000410662 305 ntBASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 OR6D1P-201ENST00000436165 939 ntBASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 MRPS31P2-201ENST00000451581 518 ntBASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 RN7SL385P-201ENST00000468873 276 ntBASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 CR383656.1-201ENST00000484916 377 ntBASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 RPL23AP72-201ENST00000492447 435 ntBASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 TXNP6-201ENST00000510190 310 ntBASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 RAB9BP1-201ENST00000519581 626 ntBASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 RPL21P12-201ENST00000559810 515 ntBASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 AL353997.4-201ENST00000586196 166 ntBASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 GLUD1P4-201ENST00000590914 418 ntBASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 AP000346.3-201ENST00000622821 210 ntBASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 AC135068.12-201ENST00000637370 931 ntBASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 AC009229.4-201ENST00000623854 1947 ntBASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 USP44-208ENST00000552440 1818 ntTSL 5 BASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 AP000756.2-201ENST00000624168 2567 ntBASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.86□□□□□ -1.31
ZC3H4Q9UPT8 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 AC010329.2-201ENST00000595195 2737 ntBASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 AC232271.1-201ENST00000602455 2715 ntBASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 Y_RNA.414-201ENST00000384011 101 ntBASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 SNORA51.6-201ENST00000384151 125 ntBASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 RPL37P10-201ENST00000412884 288 ntBASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 AC092832.1-201ENST00000422934 400 ntBASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 AC093655.2-201ENST00000425735 631 ntBASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 Z98949.2-201ENST00000440996 144 ntBASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 HMGB1P15-201ENST00000453854 435 ntBASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms