Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AC103710.3-201ENST00000608157 948 ntBASIC5.97□□□□□ -1.45
CNTN3Q9P232 uc_338.12-201ENST00000616344 181 ntBASIC5.97□□□□□ -1.45
CNTN3Q9P232 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.97□□□□□ -1.45
CNTN3Q9P232 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.97□□□□□ -1.45
CNTN3Q9P232 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CNTN3Q9P232 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
CNTN3Q9P232 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CNTN3Q9P232 AC133552.1-201ENST00000569988 4007 ntBASIC5.97□□□□□ -1.45
CNTN3Q9P232 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.97□□□□□ -1.45
CNTN3Q9P232 AC068870.1-201ENST00000563737 2455 ntBASIC5.97□□□□□ -1.45
CNTN3Q9P232 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
CNTN3Q9P232 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.45
CNTN3Q9P232 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.45
CNTN3Q9P232 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CNTN3Q9P232 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CNTN3Q9P232 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CNTN3Q9P232 SNORA33.2-201ENST00000365413 134 ntBASIC5.96□□□□□ -1.46
CNTN3Q9P232 RNU6-1207P-201ENST00000384343 107 ntBASIC5.96□□□□□ -1.46
CNTN3Q9P232 RNU6-1297P-201ENST00000384415 104 ntBASIC5.96□□□□□ -1.46
CNTN3Q9P232 RNU6-178P-201ENST00000384631 104 ntBASIC5.96□□□□□ -1.46
CNTN3Q9P232 MIR514A2-201ENST00000385131 88 ntBASIC5.96□□□□□ -1.46
CNTN3Q9P232 MIR514A3-201ENST00000385132 88 ntBASIC5.96□□□□□ -1.46
CNTN3Q9P232 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.96□□□□□ -1.46
CNTN3Q9P232 RPL5P18-201ENST00000406671 891 ntBASIC5.96□□□□□ -1.46
CNTN3Q9P232 Y_RNA.615-201ENST00000410769 117 ntBASIC5.96□□□□□ -1.46
CNTN3Q9P232 RPL31P45-201ENST00000419532 356 ntBASIC5.96□□□□□ -1.46
CNTN3Q9P232 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC5.96□□□□□ -1.46
CNTN3Q9P232 AL031736.2-201ENST00000426573 787 ntBASIC5.96□□□□□ -1.46
CNTN3Q9P232 AL590233.1-201ENST00000430017 456 ntBASIC5.96□□□□□ -1.46
CNTN3Q9P232 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.96□□□□□ -1.46
CNTN3Q9P232 RPL36P19-201ENST00000430744 301 ntBASIC5.96□□□□□ -1.46
CNTN3Q9P232 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.96□□□□□ -1.46
CNTN3Q9P232 AC099670.2-201ENST00000435130 321 ntBASIC5.96□□□□□ -1.46
CNTN3Q9P232 AC239809.1-201ENST00000450470 217 ntBASIC5.96□□□□□ -1.46
CNTN3Q9P232 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.96□□□□□ -1.46
CNTN3Q9P232 AL035090.1-201ENST00000454835 332 ntBASIC5.96□□□□□ -1.46
CNTN3Q9P232 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.96□□□□□ -1.46
CNTN3Q9P232 RN7SL214P-201ENST00000487317 265 ntBASIC5.96□□□□□ -1.46
CNTN3Q9P232 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.96□□□□□ -1.46
CNTN3Q9P232 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.96□□□□□ -1.46
CNTN3Q9P232 AC122688.1-201ENST00000541494 223 ntBASIC5.96□□□□□ -1.46
CNTN3Q9P232 RPL21P12-201ENST00000559810 515 ntBASIC5.96□□□□□ -1.46
CNTN3Q9P232 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.96□□□□□ -1.46
CNTN3Q9P232 AC018552.3-201ENST00000567416 561 ntBASIC5.96□□□□□ -1.46
CNTN3Q9P232 AC090615.1-201ENST00000577519 154 ntBASIC5.96□□□□□ -1.46
CNTN3Q9P232 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.96□□□□□ -1.46
CNTN3Q9P232 RNU6ATAC35P-201ENST00000609276 444 ntBASIC5.96□□□□□ -1.46
CNTN3Q9P232 AC040896.1-201ENST00000613819 479 ntBASIC5.96□□□□□ -1.46
CNTN3Q9P232 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.96□□□□□ -1.46
CNTN3Q9P232 MIR6837-201ENST00000620884 64 ntBASIC5.96□□□□□ -1.46
CNTN3Q9P232 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.96□□□□□ -1.46
CNTN3Q9P232 AC079776.5-201ENST00000641920 211 ntBASIC5.96□□□□□ -1.46
CNTN3Q9P232 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CNTN3Q9P232 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CNTN3Q9P232 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.96□□□□□ -1.46
CNTN3Q9P232 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CNTN3Q9P232 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.96□□□□□ -1.46
CNTN3Q9P232 MTND5P16-201ENST00000460269 1703 ntBASIC5.96□□□□□ -1.46
CNTN3Q9P232 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CNTN3Q9P232 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
CNTN3Q9P232 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.96□□□□□ -1.46
CNTN3Q9P232 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CNTN3Q9P232 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CNTN3Q9P232 AC114774.1-201ENST00000507410 1770 ntBASIC5.95□□□□□ -1.46
CNTN3Q9P232 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CNTN3Q9P232 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
CNTN3Q9P232 LARP1BP1-201ENST00000506036 1359 ntBASIC5.95□□□□□ -1.46
CNTN3Q9P232 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CNTN3Q9P232 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CNTN3Q9P232 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CNTN3Q9P232 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.95□□□□□ -1.46
CNTN3Q9P232 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CNTN3Q9P232 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.95□□□□□ -1.46
CNTN3Q9P232 RNA5SP335-201ENST00000363817 110 ntBASIC5.95□□□□□ -1.46
CNTN3Q9P232 RNU6-831P-201ENST00000384548 107 ntBASIC5.95□□□□□ -1.46
CNTN3Q9P232 U3.20-201ENST00000390909 217 ntBASIC5.95□□□□□ -1.46
CNTN3Q9P232 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CNTN3Q9P232 RNU2-62P-201ENST00000410868 191 ntBASIC5.95□□□□□ -1.46
CNTN3Q9P232 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.95□□□□□ -1.46
CNTN3Q9P232 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC5.95□□□□□ -1.46
CNTN3Q9P232 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.95□□□□□ -1.46
CNTN3Q9P232 UBE2V1P13-201ENST00000436983 439 ntBASIC5.95□□□□□ -1.46
CNTN3Q9P232 AC105399.1-202ENST00000447303 205 ntBASIC5.95□□□□□ -1.46
CNTN3Q9P232 snoU13.8-201ENST00000458890 104 ntBASIC5.95□□□□□ -1.46
CNTN3Q9P232 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC5.95□□□□□ -1.46
CNTN3Q9P232 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CNTN3Q9P232 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.95□□□□□ -1.46
CNTN3Q9P232 AC097486.1-201ENST00000515331 210 ntBASIC5.95□□□□□ -1.46
CNTN3Q9P232 RN7SKP99-201ENST00000517028 307 ntBASIC5.95□□□□□ -1.46
CNTN3Q9P232 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.95□□□□□ -1.46
CNTN3Q9P232 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.95□□□□□ -1.46
CNTN3Q9P232 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.95□□□□□ -1.46
CNTN3Q9P232 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.95□□□□□ -1.46
CNTN3Q9P232 AC126177.5-201ENST00000549599 178 ntBASIC5.95□□□□□ -1.46
CNTN3Q9P232 FRG2DP-202ENST00000566967 323 ntBASIC5.95□□□□□ -1.46
CNTN3Q9P232 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.95□□□□□ -1.46
CNTN3Q9P232 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.95□□□□□ -1.46
CNTN3Q9P232 AC136443.5-201ENST00000603741 370 ntBASIC5.95□□□□□ -1.46
CNTN3Q9P232 AC004908.2-201ENST00000609090 574 ntBASIC5.95□□□□□ -1.46
CNTN3Q9P232 AC040168.1-201ENST00000623594 991 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms