Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 PRELID3BP6-201ENST00000503839 571 ntBASIC2.82□□□□□ -1.96
CCDC88CQ9P219 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC88CQ9P219 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.82□□□□□ -1.96
CCDC88CQ9P219 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.82□□□□□ -1.96
CCDC88CQ9P219 MTND5P21-201ENST00000531961 522 ntBASIC2.82□□□□□ -1.96
CCDC88CQ9P219 AC025260.1-201ENST00000548858 430 ntBASIC2.82□□□□□ -1.96
CCDC88CQ9P219 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC2.82□□□□□ -1.96
CCDC88CQ9P219 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC88CQ9P219 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.82□□□□□ -1.96
CCDC88CQ9P219 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC2.82□□□□□ -1.96
CCDC88CQ9P219 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.82□□□□□ -1.96
CCDC88CQ9P219 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC2.82□□□□□ -1.96
CCDC88CQ9P219 AC022509.4-201ENST00000621404 572 ntBASIC2.82□□□□□ -1.96
CCDC88CQ9P219 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC88CQ9P219 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.82□□□□□ -1.96
CCDC88CQ9P219 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC88CQ9P219 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
CCDC88CQ9P219 AC011155.1-201ENST00000316512 456 ntBASIC2.81□□□□□ -1.96
CCDC88CQ9P219 RNU6-603P-201ENST00000411403 107 ntBASIC2.81□□□□□ -1.96
CCDC88CQ9P219 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC2.81□□□□□ -1.96
CCDC88CQ9P219 TRGV6-201ENST00000417928 299 ntBASIC2.81□□□□□ -1.96
CCDC88CQ9P219 ARF4P2-201ENST00000430209 526 ntBASIC2.81□□□□□ -1.96
CCDC88CQ9P219 AL135938.1-201ENST00000443141 297 ntBASIC2.81□□□□□ -1.96
CCDC88CQ9P219 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC88CQ9P219 AC118282.1-201ENST00000506408 765 ntBASIC2.81□□□□□ -1.96
CCDC88CQ9P219 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC2.81□□□□□ -1.96
CCDC88CQ9P219 AC119751.1-201ENST00000513357 765 ntBASIC2.81□□□□□ -1.96
CCDC88CQ9P219 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC88CQ9P219 AC109329.2-201ENST00000519658 482 ntBASIC2.81□□□□□ -1.96
CCDC88CQ9P219 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.81□□□□□ -1.96
CCDC88CQ9P219 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC88CQ9P219 AC022146.1-201ENST00000595307 847 ntBASIC2.81□□□□□ -1.96
CCDC88CQ9P219 PSMA6P4-201ENST00000603247 718 ntBASIC2.81□□□□□ -1.96
CCDC88CQ9P219 AC090953.1-201ENST00000604305 1092 ntBASIC2.81□□□□□ -1.96
CCDC88CQ9P219 AC019131.2-201ENST00000609071 870 ntBASIC2.81□□□□□ -1.96
CCDC88CQ9P219 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.81□□□□□ -1.96
CCDC88CQ9P219 AP001148.1-201ENST00000624124 2359 ntBASIC2.81□□□□□ -1.96
CCDC88CQ9P219 AL365361.1-201ENST00000566942 3481 ntBASIC2.81□□□□□ -1.96
CCDC88CQ9P219 OR5BR1P-201ENST00000524992 1330 ntBASIC2.81□□□□□ -1.96
CCDC88CQ9P219 MIR512-1-201ENST00000384913 84 ntBASIC2.81□□□□□ -1.96
CCDC88CQ9P219 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.81□□□□□ -1.96
CCDC88CQ9P219 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC88CQ9P219 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC88CQ9P219 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC88CQ9P219 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC88CQ9P219 AC022080.3-201ENST00000544433 482 ntBASIC2.81□□□□□ -1.96
CCDC88CQ9P219 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC88CQ9P219 HMGB1P6-201ENST00000569046 646 ntBASIC2.81□□□□□ -1.96
CCDC88CQ9P219 MIR4298-201ENST00000584380 73 ntBASIC2.81□□□□□ -1.96
CCDC88CQ9P219 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC88CQ9P219 PRELID3BP8-201ENST00000604148 295 ntBASIC2.81□□□□□ -1.96
CCDC88CQ9P219 SNORA35B-201ENST00000607417 129 ntBASIC2.81□□□□□ -1.96
CCDC88CQ9P219 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.81□□□□□ -1.96
CCDC88CQ9P219 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC88CQ9P219 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC88CQ9P219 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC88CQ9P219 AC017002.4-201ENST00000604721 1525 ntBASIC2.81□□□□□ -1.96
CCDC88CQ9P219 AC009313.2-201ENST00000417893 1941 ntBASIC2.8□□□□□ -1.96
CCDC88CQ9P219 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
CCDC88CQ9P219 AC108734.1-201ENST00000439549 399 ntBASIC2.8□□□□□ -1.96
CCDC88CQ9P219 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC88CQ9P219 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC88CQ9P219 AC117440.1-201ENST00000474107 571 ntBASIC2.8□□□□□ -1.96
CCDC88CQ9P219 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC88CQ9P219 AC005351.1-201ENST00000511152 786 ntBASIC2.8□□□□□ -1.96
CCDC88CQ9P219 SNORD116-26-201ENST00000516006 96 ntBASIC2.8□□□□□ -1.96
CCDC88CQ9P219 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC88CQ9P219 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.8□□□□□ -1.96
CCDC88CQ9P219 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.8□□□□□ -1.96
CCDC88CQ9P219 MIR4512-201ENST00000583257 77 ntBASIC2.8□□□□□ -1.96
CCDC88CQ9P219 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC88CQ9P219 AL592494.3-201ENST00000609485 464 ntBASIC2.8□□□□□ -1.96
CCDC88CQ9P219 XIST_intron.1-201ENST00000619444 68 ntBASIC2.8□□□□□ -1.96
CCDC88CQ9P219 AC004943.3-201ENST00000624116 600 ntBASIC2.8□□□□□ -1.96
CCDC88CQ9P219 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC88CQ9P219 AC110792.3-201ENST00000595906 1614 ntBASIC2.8□□□□□ -1.96
CCDC88CQ9P219 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC88CQ9P219 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.8□□□□□ -1.96
CCDC88CQ9P219 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC88CQ9P219 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC88CQ9P219 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CCDC88CQ9P219 ANKRD36P1-201ENST00000344424 659 ntBASIC2.8□□□□□ -1.96
CCDC88CQ9P219 MIR422A-201ENST00000362286 90 ntBASIC2.8□□□□□ -1.96
CCDC88CQ9P219 MIR92A2-201ENST00000385299 75 ntBASIC2.8□□□□□ -1.96
CCDC88CQ9P219 ST13P14-201ENST00000474095 734 ntBASIC2.8□□□□□ -1.96
CCDC88CQ9P219 AP004217.1-201ENST00000480579 346 ntBASIC2.8□□□□□ -1.96
CCDC88CQ9P219 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC88CQ9P219 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.8□□□□□ -1.96
CCDC88CQ9P219 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC88CQ9P219 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC88CQ9P219 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC88CQ9P219 AC034236.3-201ENST00000605999 461 ntBASIC2.8□□□□□ -1.96
CCDC88CQ9P219 C2orf27A-204ENST00000623058 969 ntBASIC2.8□□□□□ -1.96
CCDC88CQ9P219 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC88CQ9P219 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC88CQ9P219 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC88CQ9P219 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC88CQ9P219 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
CCDC88CQ9P219 UBE2V1P2-201ENST00000397758 440 ntBASIC2.79□□□□□ -1.96
CCDC88CQ9P219 AC012498.1-201ENST00000424037 437 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms