Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.09□□□□□ -1.91
VAPAQ9P0L0 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.09□□□□□ -1.91
VAPAQ9P0L0 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.09□□□□□ -1.91
VAPAQ9P0L0 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.09□□□□□ -1.91
VAPAQ9P0L0 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.09□□□□□ -1.91
VAPAQ9P0L0 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.09□□□□□ -1.91
VAPAQ9P0L0 AC090312.2-201ENST00000582687 378 ntBASIC3.09□□□□□ -1.91
VAPAQ9P0L0 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.09□□□□□ -1.91
VAPAQ9P0L0 AC091903.1-201ENST00000624322 454 ntBASIC3.09□□□□□ -1.91
VAPAQ9P0L0 AC009093.8-201ENST00000641769 292 ntBASIC3.09□□□□□ -1.91
VAPAQ9P0L0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
VAPAQ9P0L0 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.92
VAPAQ9P0L0 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.09□□□□□ -1.92
VAPAQ9P0L0 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
VAPAQ9P0L0 PABPC1P7-201ENST00000413177 1513 ntBASIC3.09□□□□□ -1.92
VAPAQ9P0L0 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.08□□□□□ -1.92
VAPAQ9P0L0 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.08□□□□□ -1.92
VAPAQ9P0L0 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
VAPAQ9P0L0 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
VAPAQ9P0L0 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
VAPAQ9P0L0 AL512646.1-201ENST00000269395 1077 ntBASIC3.08□□□□□ -1.92
VAPAQ9P0L0 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VAPAQ9P0L0 AL359837.1-201ENST00000381357 287 ntBASIC3.08□□□□□ -1.92
VAPAQ9P0L0 SNORA5A-201ENST00000384111 134 ntBASIC3.08□□□□□ -1.92
VAPAQ9P0L0 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VAPAQ9P0L0 MIR1250-201ENST00000408098 113 ntBASIC3.08□□□□□ -1.92
VAPAQ9P0L0 AC073264.1-201ENST00000411508 416 ntBASIC3.08□□□□□ -1.92
VAPAQ9P0L0 AC007899.1-201ENST00000412776 775 ntBASIC3.08□□□□□ -1.92
VAPAQ9P0L0 RPL32P35-201ENST00000415214 394 ntBASIC3.08□□□□□ -1.92
VAPAQ9P0L0 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.08□□□□□ -1.92
VAPAQ9P0L0 DPPA2P1-201ENST00000428060 556 ntBASIC3.08□□□□□ -1.92
VAPAQ9P0L0 UBE2V1P1-201ENST00000430836 445 ntBASIC3.08□□□□□ -1.92
VAPAQ9P0L0 AL513175.1-201ENST00000431492 780 ntBASIC3.08□□□□□ -1.92
VAPAQ9P0L0 AC073063.1-201ENST00000434352 607 ntBASIC3.08□□□□□ -1.92
VAPAQ9P0L0 XKRY2-201ENST00000442362 1093 ntBASIC3.08□□□□□ -1.92
VAPAQ9P0L0 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.08□□□□□ -1.92
VAPAQ9P0L0 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.08□□□□□ -1.92
VAPAQ9P0L0 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.08□□□□□ -1.92
VAPAQ9P0L0 ST13P14-201ENST00000474095 734 ntBASIC3.08□□□□□ -1.92
VAPAQ9P0L0 AC106707.2-201ENST00000484182 374 ntBASIC3.08□□□□□ -1.92
VAPAQ9P0L0 AC093278.1-201ENST00000494700 600 ntBASIC3.08□□□□□ -1.92
VAPAQ9P0L0 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VAPAQ9P0L0 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.08□□□□□ -1.92
VAPAQ9P0L0 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.08□□□□□ -1.92
VAPAQ9P0L0 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.08□□□□□ -1.92
VAPAQ9P0L0 RN7SKP21-201ENST00000516503 220 ntBASIC3.08□□□□□ -1.92
VAPAQ9P0L0 RNU6-1073P-201ENST00000517182 106 ntBASIC3.08□□□□□ -1.92
VAPAQ9P0L0 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.08□□□□□ -1.92
VAPAQ9P0L0 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.08□□□□□ -1.92
VAPAQ9P0L0 OR4H12P-201ENST00000556269 907 ntBASIC3.08□□□□□ -1.92
VAPAQ9P0L0 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.08□□□□□ -1.92
VAPAQ9P0L0 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.08□□□□□ -1.92
VAPAQ9P0L0 MIR3160-1-201ENST00000577972 85 ntBASIC3.08□□□□□ -1.92
VAPAQ9P0L0 AC007566.2-201ENST00000603642 413 ntBASIC3.08□□□□□ -1.92
VAPAQ9P0L0 AC016877.3-201ENST00000606778 504 ntBASIC3.08□□□□□ -1.92
VAPAQ9P0L0 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.08□□□□□ -1.92
VAPAQ9P0L0 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
VAPAQ9P0L0 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.08□□□□□ -1.92
VAPAQ9P0L0 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
VAPAQ9P0L0 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
VAPAQ9P0L0 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.08□□□□□ -1.92
VAPAQ9P0L0 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.08□□□□□ -1.92
VAPAQ9P0L0 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
VAPAQ9P0L0 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.07□□□□□ -1.92
VAPAQ9P0L0 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
VAPAQ9P0L0 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
VAPAQ9P0L0 RPL21P3-201ENST00000395517 478 ntBASIC3.07□□□□□ -1.92
VAPAQ9P0L0 DSTNP4-201ENST00000399472 474 ntBASIC3.07□□□□□ -1.92
VAPAQ9P0L0 RPL23AP47-201ENST00000408017 460 ntBASIC3.07□□□□□ -1.92
VAPAQ9P0L0 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.07□□□□□ -1.92
VAPAQ9P0L0 RPL21P66-201ENST00000426566 466 ntBASIC3.07□□□□□ -1.92
VAPAQ9P0L0 RPL36P19-201ENST00000430744 301 ntBASIC3.07□□□□□ -1.92
VAPAQ9P0L0 RPL23AP69-201ENST00000431134 458 ntBASIC3.07□□□□□ -1.92
VAPAQ9P0L0 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.07□□□□□ -1.92
VAPAQ9P0L0 AC068135.1-201ENST00000446164 246 ntBASIC3.07□□□□□ -1.92
VAPAQ9P0L0 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.07□□□□□ -1.92
VAPAQ9P0L0 AC233982.1-201ENST00000451247 436 ntBASIC3.07□□□□□ -1.92
VAPAQ9P0L0 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.07□□□□□ -1.92
VAPAQ9P0L0 AC089999.1-201ENST00000460336 374 ntBASIC3.07□□□□□ -1.92
VAPAQ9P0L0 AC146507.2-201ENST00000460608 476 ntBASIC3.07□□□□□ -1.92
VAPAQ9P0L0 AC091179.1-201ENST00000461606 579 ntBASIC3.07□□□□□ -1.92
VAPAQ9P0L0 AC091564.1-201ENST00000464563 479 ntBASIC3.07□□□□□ -1.92
VAPAQ9P0L0 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
VAPAQ9P0L0 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.07□□□□□ -1.92
VAPAQ9P0L0 APOOP4-201ENST00000513530 597 ntBASIC3.07□□□□□ -1.92
VAPAQ9P0L0 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.07□□□□□ -1.92
VAPAQ9P0L0 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
VAPAQ9P0L0 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.07□□□□□ -1.92
VAPAQ9P0L0 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.07□□□□□ -1.92
VAPAQ9P0L0 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.07□□□□□ -1.92
VAPAQ9P0L0 VN1R85P-201ENST00000601587 426 ntBASIC3.07□□□□□ -1.92
VAPAQ9P0L0 IGHV3-29-201ENST00000604817 344 ntBASIC3.07□□□□□ -1.92
VAPAQ9P0L0 AC015849.2-201ENST00000605738 409 ntBASIC3.07□□□□□ -1.92
VAPAQ9P0L0 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
VAPAQ9P0L0 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
VAPAQ9P0L0 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
VAPAQ9P0L0 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.07□□□□□ -1.92
VAPAQ9P0L0 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
VAPAQ9P0L0 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
VAPAQ9P0L0 DYNLT3P1-201ENST00000378574 347 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms